RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 DTLQ9NZJ0 730 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 BCLAF3A2AJT9 711 aaKnown RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 HMX2A2RU54 273 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 CLDN5O00501 218 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 NBPF20Q3BBV1 942 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 ACSBG2Q5FVE4 666 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 CHSY1Q86X52 802 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 TREML1Q86YW5 311 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 GSDMBQ8TAX9 411 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 PTCD3Q96EY7 689 aaKnown RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 SIGLEC10Q96LC7 697 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 EBNA1BP2Q99848 306 aaKnown RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 ZNF670Q9BS34 389 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 SAR1AQ9NR31 198 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 ADARB2Q9NS39 739 aaKnown RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 CNTN3Q9P232 1028 aa16.79■□□□□ 0.28
TRIM27-202ENST00000377199 MRPL42Q9Y6G3 142 aaKnown RBP16.79■□□□□ 0.28
TRIM27-202ENST00000377199 PTPRFP10586 1907 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 CCDC78A2IDD5 438 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 SPDYE5A6NIY4 337 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 MEI4A8MW99 385 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 RECQL4O94761 1208 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 VAV1P15498 845 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 GNAZP19086 355 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 UBAP2LQ14157 1087 aaKnown RBP16.78■□□□□ 0.28
TRIM27-202ENST00000377199 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 SPDL1Q96EA4 605 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 NFKBIZQ9BYH8 718 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 KCNK1O00180 336 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 NEBLO76041 1014 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 MGAT1P26572 445 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 ABL2P42684 1182 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 THOC5Q13769 683 aaKnown RBP16.78■□□□□ 0.28
TRIM27-202ENST00000377199 TMEM110Q86TL2 294 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 SLC25A41Q8N5S1 370 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 ZNF398Q8TD17 642 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 LENG1Q96BZ8 264 aaPredicted RBP16.78■□□□□ 0.28
TRIM27-202ENST00000377199 SLC4A5Q9BY07 1137 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 MAF1Q9H063 256 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 MROH8Q9H579 483 aa16.78■□□□□ 0.28
TRIM27-202ENST00000377199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.77■□□□□ 0.28
TRIM27-202ENST00000377199 CXCL11O14625 94 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 CAPN9O14815 690 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 WFS1O76024 890 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 PGM1P36871 562 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 GNL1P36915 607 aaPredicted RBP16.77■□□□□ 0.28
TRIM27-202ENST00000377199 SULT1E1P49888 294 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 PPP2R5DQ14738 602 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 MARCH8Q5T0T0 291 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 CTU1Q7Z7A3 348 aaKnown RBP16.77■□□□□ 0.28
TRIM27-202ENST00000377199 DPP9Q86TI2 863 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 RPAINQ86UA6 219 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 COLGALT1Q8NBJ5 622 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 STMN2Q93045 179 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 SLC24A3Q9HC58 644 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.28
TRIM27-202ENST00000377199 PSAT1Q9Y617 370 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 SPTLC1O15269 473 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 MFSD11O43934 449 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 ARL4AP40617 200 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 PEX19P40855 299 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 ADIGQ0VDE8 80 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 PPM1JQ5JR12 505 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 NCBP2-AS2Q69YL0 99 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 DEFB106AQ8N104 65 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 TEX9Q8N6V9 391 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 STKLD1Q8NE28 680 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 AGR3Q8TD06 166 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 HTR3CQ8WXA8 447 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 LNPEPQ9UIQ6 1025 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 KIAA1257Q9ULG3 409 aa16.77■□□□□ 0.28
TRIM27-202ENST00000377199 PIN4Q9Y237 131 aaKnown RBP16.77■□□□□ 0.28
TRIM27-202ENST00000377199 MDM4O15151 490 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 TSHRP16473 764 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 PRKCHP24723 683 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 HOXA11P31270 313 aaPredicted RBP16.77■□□□□ 0.27
TRIM27-202ENST00000377199 MLH1P40692 756 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 GRM5P41594 1212 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 NDUFV1P49821 464 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 PDE1BQ01064 536 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 CRYMQ14894 314 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 HSF5Q4G112 596 aaPredicted RBP16.77■□□□□ 0.27
TRIM27-202ENST00000377199 PKDCCQ504Y2 493 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 ATG16L1Q676U5 607 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 HACE1Q8IYU2 909 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 BEST2Q8NFU1 509 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 TFB1MQ8WVM0 346 aaKnown RBP16.77■□□□□ 0.27
TRIM27-202ENST00000377199 USP6NLQ92738 828 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 PGBD4Q96DM1 585 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 RNF39Q9H2S5 420 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 SNX25Q9H3E2 840 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 ACSS2Q9NR19 701 aa16.77■□□□□ 0.27
TRIM27-202ENST00000377199 ERVK-10P10266 1014 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 RSPH3Q86UC2 560 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms