RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 VSIG10LQ86VR7 867 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 WDR49Q8IV35 697 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 FRMD8Q9BZ67 464 aaPredicted RBP17.04■□□□□ 0.32
TRIM39-201ENST00000376656 GRIP2Q9C0E4 1043 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 PORCNQ9H237 461 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 STN1Q9H668 368 aaKnown RBP17.04■□□□□ 0.32
TRIM39-201ENST00000376656 JPH1Q9HDC5 661 aaPredicted RBP17.04■□□□□ 0.32
TRIM39-201ENST00000376656 NXF1Q9UBU9 619 aaKnown RBP17.04■□□□□ 0.32
TRIM39-201ENST00000376656 ADCY3O60266 1144 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 ATP6V1B1P15313 513 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 GRIA1P42261 906 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 NAMPTP43490 491 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 PCLAFQ15004 111 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 TRIM73Q86UV7 250 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 PLD5Q8N7P1 536 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 CMTM5Q96DZ9 223 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 RHBDL2Q9NX52 303 aa17.04■□□□□ 0.32
TRIM39-201ENST00000376656 DCXO43602 365 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 ZBED1O96006 694 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 MTTPP55157 894 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 HPCAP84074 193 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 TRPC3Q13507 836 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 ZNF699Q32M78 642 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 C10orf107Q8IVU9 208 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 GPRASP2Q96D09 838 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 NLRP4Q96MN2 994 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 RNF157Q96PX1 679 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 EBNA1BP2Q99848 306 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 GPATCH2LQ9NWQ4 482 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 ZNF195O14628 629 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 DENRO43583 198 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 HMGCRP04035 888 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 CD1EP15812 388 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 CCND2P30279 289 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 GMPRP36959 345 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 SERPINB9P50453 376 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 TFDP2Q14188 446 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 C15orf59Q2T9L4 293 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 XKR3Q5GH77 459 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 ABHD15Q6UXT9 468 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 PQLC1Q8N2U9 271 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 LHX5Q9H2C1 402 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 DHX33Q9H6R0 707 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 DNAJC28Q9NX36 388 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 MAP3K20Q9NYL2 800 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 PIK3R2O00459 728 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 PLIN3O60664 434 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 METTL18O95568 372 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 ALDOAP04075 364 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 TFAMQ00059 246 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 CDO1Q16878 200 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 MYLK3Q32MK0 819 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 TMEM259Q4ZIN3 620 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 TRNP1Q6NT89 227 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 PAOXQ6QHF9 649 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 TIFABQ6ZNK6 161 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 ZFP28Q8NHY6 868 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 RTP4Q96DX8 246 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 RBM38Q9H0Z9 239 aaKnown RBP17.03■□□□□ 0.32
TRIM39-201ENST00000376656 APPL1Q9UKG1 709 aa17.03■□□□□ 0.32
TRIM39-201ENST00000376656 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 TPP1O14773 563 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 COX4I1P13073 169 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 CDH8P55286 799 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 PDE1CQ14123 709 aaPredicted RBP17.02■□□□□ 0.32
TRIM39-201ENST00000376656 SMAD1Q15797 465 aaKnown RBP17.02■□□□□ 0.32
TRIM39-201ENST00000376656 TMEM130Q8N3G9 435 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 KLHL23Q8NBE8 558 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 ZNF526Q8TF50 670 aaPredicted RBP17.02■□□□□ 0.32
TRIM39-201ENST00000376656 TCHPQ9BT92 498 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 ASNSD1Q9NWL6 643 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
TRIM39-201ENST00000376656 ZBTB14O43829 449 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 CRTAMO95727 393 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 SERPINE1P05121 402 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 MAGEA3P43357 314 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 CNTN2Q02246 1040 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 SLC27A3Q5K4L6 730 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 FAM102AQ5T9C2 384 aaPredicted RBP17.02■□□□□ 0.31
TRIM39-201ENST00000376656 LRRC39Q96DD0 335 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 CNBD2Q96M20 576 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 XYLT2Q9H1B5 865 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 MAN1C1Q9NR34 630 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 PSMD13Q9UNM6 376 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 PCDHA11Q9Y5I1 949 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 SIP14410 1827 aa17.02■□□□□ 0.31
TRIM39-201ENST00000376656 FAM189A1O60320 539 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 PFDN1O60925 122 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 PRKCGP05129 697 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 ARL2P36404 184 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 MAGEA6P43360 314 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 MYBPC1Q00872 1141 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 CNGA3Q16281 694 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 PQLC3Q8N755 202 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 PPP4R1Q8TF05 950 aa17.01■□□□□ 0.31
TRIM39-201ENST00000376656 SSX2IPQ9Y2D8 614 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms