RNA–Protein interactions for RNA: ENST00000376089.6

LST1-205, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-205ENST00000376089 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 CHFRQ96EP1 664 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 SPATA17Q96L03 361 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 ZNF518BQ9C0D4 1074 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 KCTD10Q9H3F6 313 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 TMEM30AQ9NV96 361 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
LST1-205ENST00000376089 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
LST1-205ENST00000376089 VNN1O95497 513 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 ESRRAP11474 423 aaPredicted RBP12.61□□□□□ -0.39
LST1-205ENST00000376089 HDCP19113 662 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 C19orf57Q0VDD7 668 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 GRSF1Q12849 480 aaKnown RBP eCLIP12.61□□□□□ -0.39
LST1-205ENST00000376089 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
LST1-205ENST00000376089 PDGFRLQ15198 375 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 ZNF667Q5HYK9 610 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 PKN3Q6P5Z2 889 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 CPA6Q8N4T0 437 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 SH3RF2Q8TEC5 729 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 OSCP1Q8WVF1 389 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 SECISBP2LQ93073 1101 aaKnown RBP12.61□□□□□ -0.39
LST1-205ENST00000376089 ALKBH8Q96BT7 664 aaKnown RBP12.61□□□□□ -0.39
LST1-205ENST00000376089 MED10Q9BTT4 135 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 ELOVL4Q9GZR5 314 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 SOX17Q9H6I2 414 aaPredicted RBP12.61□□□□□ -0.39
LST1-205ENST00000376089 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 TRPM5Q9NZQ8 1165 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 RAB23Q9ULC3 237 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 MAPK8IP1Q9UQF2 711 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 CFAP54Q96N23 3096 aa12.61□□□□□ -0.39
LST1-205ENST00000376089 RIF1Q5UIP0 2472 aaKnown RBP12.61□□□□□ -0.39
LST1-205ENST00000376089 K7ESF4 209 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 PDXKO00764 312 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 CALUO43852 315 aaPredicted RBP12.6□□□□□ -0.39
LST1-205ENST00000376089 EGFP01133 1207 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 C4BPAP04003 597 aaKnown RBP12.6□□□□□ -0.39
LST1-205ENST00000376089 MYL1P05976 194 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 GJA4P35212 333 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 AP3M2P53677 418 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 TMEM196Q5HYL7 178 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 ARMC10Q8N2F6 343 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 ATP2A3Q93084 1043 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
LST1-205ENST00000376089 RMDN1Q96DB5 314 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 C8orf48Q96LL4 319 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 SDCBP2Q9H190 292 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 ECT2Q9H8V3 914 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 EHD2Q9NZN4 543 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 FRMD4BQ9Y2L6 1034 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 PTPRZ1P23471 2315 aaPredicted RBP12.6□□□□□ -0.39
LST1-205ENST00000376089 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 MYH10P35580 1976 aa12.6□□□□□ -0.39
LST1-205ENST00000376089 LEFTY2O00292 366 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 TRDMT1O14717 391 aaKnown RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 CPNE3O75131 537 aaKnown RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 PAPSS2O95340 614 aaPredicted RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 FAM163BP0C2L3 166 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 PIK3CAP42336 1068 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 GRIA4P48058 902 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 PDE6CP51160 858 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 NOP14P78316 857 aaKnown RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 AMPD2Q01433 879 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 TAF10Q12962 218 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 SIM2Q14190 667 aaPredicted RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 XP32Q5T750 250 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 SPOPLQ6IQ16 392 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 KRBA2Q6ZNG9 492 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 SYNPOQ8N3V7 929 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 FAM46AQ96IP4 442 aaKnown RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 CEP295NLQ96MC4 621 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 P2RY13Q9BPV8 354 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 MMRN2Q9H8L6 949 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 FBRSL1Q9HCM7 1045 aaKnown RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 POLR3BQ9NW08 1133 aaPredicted RBP12.59□□□□□ -0.39
LST1-205ENST00000376089 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 USP18Q9UMW8 372 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 ARHGAP26Q9UNA1 814 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
LST1-205ENST00000376089 FAM237AA0A1B0GTK4 181 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 ZNF840PA6NDX5 716 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 KIF20AO95235 890 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 TRIM49P0CI25 452 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 TRIM49CP0CI26 452 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 CCDC130P13994 396 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 NR2F2P24468 414 aa12.58□□□□□ -0.4
LST1-205ENST00000376089 YWHAQP27348 245 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms