RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 F9P00740 461 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 URODP06132 367 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 DNAJB2P25686 324 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 CUL1Q13616 776 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 PTK6Q13882 451 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 NOMO1Q15155 1222 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 TPGS2Q68CL5 300 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 SPRED2Q7Z698 418 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 GDAP1L1Q96MZ0 367 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 RAB17Q9H0T7 212 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 RXFP1Q9HBX9 757 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 COMMD8Q9NX08 183 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 HSFX1Q9UBD0 423 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 SNX10Q9Y5X0 201 aa16.29■□□□□ 0.2
NIPAL3-204ENST00000374399 TEX28O15482 410 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 MSI1O43347 362 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ITGAVP06756 1048 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 CTSAP10619 480 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ATP2A2P16615 1042 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 HMGA1P17096 107 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 AMPD1P23109 780 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 AIF1P55008 147 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 SLC10A2Q12908 348 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ALLCQ8N6M5 410 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 FBXO32Q969P5 355 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 TKTL2Q9H0I9 626 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 AAASQ9NRG9 546 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ARHGEF38Q9NXL2 777 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 FNIP2Q9P278 1114 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 RCOR3Q9P2K3 495 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 GBF1Q92538 1859 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 RANBP2P49792 3224 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 MAP2K7O14733 419 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ETS1P14921 441 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 TUFMP49411 452 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 DPYSQ14117 519 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 TFDP2Q14188 446 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 TRIP13Q15645 432 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 NCBP2-AS2Q69YL0 99 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 TTC13Q8NBP0 860 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 RNF139Q8WU17 664 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 CAVIN3Q969G5 261 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 CEP295NLQ96MC4 621 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 TMEM121Q9BTD3 319 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 MAK16Q9BXY0 300 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 WDCPQ9H6R7 721 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 ARHGEF4Q9NR80 690 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 FAM114A2Q9NRY5 505 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 CLIC5Q9NZA1 410 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 RASAL2Q9UJF2 1139 aa16.28■□□□□ 0.2
NIPAL3-204ENST00000374399 APOL1O14791 398 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 TLL1O43897 1013 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 TBX18O95935 607 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 ZSCAN5DPP0CG00 497 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 TGM2P21980 687 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 GDF10P55107 478 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 GBE1Q04446 702 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 EFHC2Q5JST6 749 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 C1orf228Q6PIY5 440 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 SYDE1Q6ZW31 735 aaPredicted RBP16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 B4GALNT4Q76KP1 1039 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 GRK7Q8WTQ7 553 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 SLC39A13Q96H72 371 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 CCDC114Q96M63 670 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 NEU3Q9UQ49 428 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 YIPF1Q9Y548 306 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 ANAPC1Q9H1A4 1944 aa16.27■□□□□ 0.19
NIPAL3-204ENST00000374399 KCNU1A8MYU2 1149 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 MAP3K6O95382 1288 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 RARGP13631 454 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 DNAJB1P25685 340 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 PPP1R7Q15435 360 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 C9orf50Q5SZB4 431 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 EMBQ6PCB8 327 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 ARHGAP18Q8N392 663 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 HTATIP2Q9BUP3 242 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 CYP4F11Q9HBI6 524 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 FEZ2Q9UHY8 353 aaPredicted RBP16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 ZNF148Q9UQR1 794 aa16.26■□□□□ 0.19
NIPAL3-204ENST00000374399 LINC01553A4QN01 128 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 DCLK1O15075 740 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 KRT14P02533 472 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 MYOGP15173 224 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 GBP1P32455 592 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 BMPR1AP36894 532 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 GGCXP38435 758 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 NRLP54845 237 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 EIF3EP60228 445 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 ERVFC1P60507 584 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms