RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 PARNO95453 639 aaKnown RBP17.5■□□□□ 0.39
PTPN20-203ENST00000374342 ALDH2P05091 517 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 HPDP32754 393 aaPredicted RBP17.5■□□□□ 0.39
PTPN20-203ENST00000374342 ADRA1BP35368 520 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 ACTN2P35609 894 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 MAGEA4P43358 317 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 GPR15P49685 360 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 AIF1P55008 147 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 ARPP19P56211 112 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 YWHAGP61981 247 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPN20-203ENST00000374342 SDHAF4Q5VUM1 108 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 DQX1Q8TE96 717 aaKnown RBP17.5■□□□□ 0.39
PTPN20-203ENST00000374342 QKIQ96PU8 341 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPN20-203ENST00000374342 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 PCDHB5Q9Y5E4 795 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 BCLAF3A2AJT9 711 aaKnown RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 AMHP03971 560 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 CPB1P15086 417 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 FGFR3P22607 806 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 SLCO1A2P46721 670 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 NR2C2P49116 596 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 ATP1A2P50993 1020 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 GAD2Q05329 585 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 SCAPQ12770 1279 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 SLC10A2Q12908 348 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 FAM43BQ6ZT52 329 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 TMEM173Q86WV6 379 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 FUBP3Q96I24 572 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 TOX2Q96NM4 488 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 TMEM175Q9BSA9 504 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 USP29Q9HBJ7 922 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 DTLQ9NZJ0 730 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 NOVA2Q9UNW9 492 aaKnown RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 I6L893 689 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 TMEM63AO94886 807 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 FASTKD3Q14CZ7 662 aaKnown RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 HIF1AQ16665 826 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 ARL13BQ3SXY8 428 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 SLC45A4Q5BKX6 768 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 HP1BP3Q5SSJ5 553 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 BTBD8Q5XKL5 378 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 KCNT2Q6UVM3 1135 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPN20-203ENST00000374342 RFX8Q6ZV50 586 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 CENPUQ71F23 418 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 RELL1Q8IUW5 271 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 NAT8LQ8N9F0 302 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 RTP4Q96DX8 246 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 PAK5Q9P286 719 aa17.49■□□□□ 0.39
PTPN20-203ENST00000374342 GREB1Q4ZG55 1949 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 COL4A6Q14031 1691 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 TCRBV7S3A2A0A539 114 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 OR6C75A6NL08 312 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 TRIM66O15016 1216 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 BANF1O75531 89 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 F9P00740 461 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 GALTP07902 379 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 CXCR3P49682 368 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 TPI1P60174 286 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 PDIA2Q13087 525 aaKnown RBP17.48■□□□□ 0.39
PTPN20-203ENST00000374342 XRCC4Q13426 336 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 DPYSQ14117 519 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 DDR2Q16832 855 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 LONRF1Q17RB8 773 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 KDM7AQ6ZMT4 941 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 TTC9BQ8N6N2 239 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 BCL7CQ8WUZ0 217 aaPredicted RBP17.48■□□□□ 0.39
PTPN20-203ENST00000374342 RNF34Q969K3 372 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 ZNF333Q96JL9 665 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 XPO7Q9UIA9 1087 aaKnown RBP17.48■□□□□ 0.39
PTPN20-203ENST00000374342 TBX21Q9UL17 535 aa17.48■□□□□ 0.39
PTPN20-203ENST00000374342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.47■□□□□ 0.39
PTPN20-203ENST00000374342 RASGRF2O14827 1237 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 ARL4CP56559 192 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 MAGOHP61326 146 aaKnown RBP17.47■□□□□ 0.39
PTPN20-203ENST00000374342 ELAVL2Q12926 359 aaKnown RBP17.47■□□□□ 0.39
PTPN20-203ENST00000374342 MRPL58Q14197 206 aaKnown RBP17.47■□□□□ 0.39
PTPN20-203ENST00000374342 RTP2Q5QGT7 225 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 VSTM1Q6UX27 236 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 ZNF771Q7L3S4 317 aaPredicted RBP17.47■□□□□ 0.39
PTPN20-203ENST00000374342 CROCCP2Q86T23 111 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 ZBED8Q8IZ13 594 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 ATAD1Q8NBU5 361 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 OLFM3Q96PB7 478 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 TMEM109Q9BVC6 243 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 TKTL2Q9H0I9 626 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 WDCPQ9H6R7 721 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 ABCC13Q9NSE7 274 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
PTPN20-203ENST00000374342 SNX10Q9Y5X0 201 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms