RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 DRD4P21917 467 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 NDST1P52848 882 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 ROR1Q01973 937 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 LMNB2Q03252 620 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 LLGL1Q15334 1064 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 C6orf118Q5T5N4 469 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 DNAJC24Q6P3W2 148 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 APLFQ8IW19 511 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-203ENST00000374116 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 VN1R2Q8NFZ6 395 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
HMGA1-203ENST00000374116 FAM210AQ96ND0 272 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 RHOBTB2Q9BYZ6 727 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 LMAN2LQ9H0V9 348 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 SNX25Q9H3E2 840 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 NSUN3Q9H649 340 aaKnown RBP14.85□□□□□ -0.03
HMGA1-203ENST00000374116 PPANQ9NQ55 473 aaKnown RBP14.85□□□□□ -0.03
HMGA1-203ENST00000374116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.85□□□□□ -0.03
HMGA1-203ENST00000374116 IRAK3Q9Y616 596 aa14.85□□□□□ -0.03
HMGA1-203ENST00000374116 UNC80Q8N2C7 3258 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 MYBPHLA2RUH7 354 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 CCT8L1PA6NM43 557 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 RIPK2O43353 540 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 MED7O43513 233 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 TGM5O43548 720 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 AHCYL1O43865 530 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 P4HA1P13674 534 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 RPL7AP62424 266 aaKnown RBP14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ZNF252P-AS1Q0IIN9 211 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 INCA1Q0VD86 236 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 HYAL1Q12794 435 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ZNF268Q14587 947 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ACCSLQ4AC99 568 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 SLC39A12Q504Y0 691 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 DAB2IPQ5VWQ8 1189 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 RHBDF2Q6PJF5 856 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 RNF19BQ6ZMZ0 732 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 DPH6Q7L8W6 267 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ACOT1Q86TX2 421 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ERICH1Q86X53 443 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 TMEM86AQ8N2M4 240 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 TTC9BQ8N6N2 239 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 BBOF1Q8ND07 529 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ATG4AQ8WYN0 398 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 SPDL1Q96EA4 605 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 ELOVL4Q9GZR5 314 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 NOP53Q9NZM5 478 aaKnown RBP14.84□□□□□ -0.03
HMGA1-203ENST00000374116 DSEQ9UL01 958 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
HMGA1-203ENST00000374116 H7C4K7 107 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 O00370 1275 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 FESP07332 822 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 ATF2P15336 505 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 WARSP23381 471 aaKnown RBP14.83□□□□□ -0.04
HMGA1-203ENST00000374116 IVDP26440 423 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 CCNG1P51959 295 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 COPS2P61201 443 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 CAPRIN2Q6IMN6 1127 aaKnown RBP14.83□□□□□ -0.04
HMGA1-203ENST00000374116 DENND1BQ6P3S1 775 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 DCUN1D2Q6PH85 259 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 THEM5Q8N1Q8 247 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 C12orf29Q8N999 325 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 ATAD1Q8NBU5 361 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 RAPGEF5Q92565 580 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 APOL5Q9BWW9 433 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 HEMGNQ9BXL5 484 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 EMILIN2Q9BXX0 1053 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-203ENST00000374116 RXFP1Q9HBX9 757 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 CRTAC1Q9NQ79 661 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 CYTH4Q9UIA0 394 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 R3HDM2Q9Y2K5 976 aaKnown RBP14.83□□□□□ -0.04
HMGA1-203ENST00000374116 SLC27A5Q9Y2P5 690 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 NEU2Q9Y3R4 380 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 HCFC2Q9Y5Z7 792 aa14.83□□□□□ -0.04
HMGA1-203ENST00000374116 TP73O15350 636 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SOAT2O75908 522 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 GJB6O95452 261 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 VNN2O95498 520 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 PECAM1P16284 738 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 NDUFV1P49821 464 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 CLCN4P51793 760 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ADCY1Q08828 1119 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SKIV2LQ15477 1246 aaKnown RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 NIPA2Q8N8Q9 360 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC89Q8N998 374 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ITFG2Q969R8 447 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 STAMBPL1Q96FJ0 436 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 MCEEQ96PE7 176 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ROPN1BQ9BZX4 212 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 CRISPLD1Q9H336 500 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ROPN1Q9HAT0 212 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 DDX56Q9NY93 547 aaKnown RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 STK39Q9UEW8 545 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 BARX2Q9UMQ3 279 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 BACE2Q9Y5Z0 518 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 BRWD1Q9NSI6 2320 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 CLDN5O00501 218 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 RGS16O15492 202 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms