RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 BRD9Q9H8M2 597 aa5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 AGO4Q9HCK5 861 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 HPF1Q9NWY4 346 aa5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 SAE1Q9UBE0 346 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 CPA4Q9UI42 421 aa5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 SH3BGRL2Q9UJC5 107 aa5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 TRAF3IP3Q9Y228 551 aa5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 NOSIPQ9Y314 301 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 VWA7Q9Y334 891 aa5.47□□□□□ -1.53
ECHDC1-204ENST00000368292 CHD9Q3L8U1 2897 aa5.46□□□□□ -1.53
ECHDC1-204ENST00000368292 COL1A1P02452 1464 aaPredicted RBP5.46□□□□□ -1.53
ECHDC1-204ENST00000368292 C17orf113A0A1B0GUU1 675 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 NPEPPSL1A6NEC2 478 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 B4DLN1 442 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 BTBD19C9JJ37 291 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 NDC80O14777 642 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 ARHGAP6O43182 974 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 HOXC11O43248 304 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 FRS3O43559 492 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 SNX4O95219 450 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 SLC3A2P08195 630 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 THEGLP0DJG4 465 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 AKR1B1P15121 316 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 KRT9P35527 623 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 MCAMP43121 646 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 PHKA1P46020 1223 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 MEOX1P50221 254 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 ATXN1P54253 815 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 PPP3CAQ08209 521 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 ADAM15Q13444 863 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 RABEP1Q15276 862 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 ANKDD1AQ495B1 522 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 PREPLQ4J6C6 727 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 AKNAD1Q5T1N1 836 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 TLDC1Q6P9B6 456 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC149Q6ZUS6 474 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 NEK10Q6ZWH5 1172 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 USP30Q70CQ3 517 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 GALNTL5Q7Z4T8 443 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 BMP8AQ7Z5Y6 402 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 SLC9B2Q86UD5 537 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 MYCT1Q8N699 235 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 RUFY2Q8WXA3 655 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 CTNNBL1Q8WYA6 563 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 KIF1BPQ96EK5 621 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 NAF1Q96HR8 494 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 ZBED3Q96IU2 234 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 SPATA17Q96L03 361 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 SGCZQ96LD1 299 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 UBXN10Q96LJ8 280 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 JAKMIP1Q96N16 626 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 GNRHR2Q96P88 292 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 LMF1Q96S06 567 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 OR10A2Q9H208 303 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 MED4Q9NPJ6 270 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 DMRT3Q9NQL9 472 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 GPR34Q9UPC5 381 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 MRPL11Q9Y3B7 192 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 CHD7Q9P2D1 2997 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 ATRXP46100 2492 aa5.46□□□□□ -1.54
ECHDC1-204ENST00000368292 CEMIPQ8WUJ3 1361 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 GOLGA6L10A0A0M3HER8 536 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 B4E171 279 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 B8ZZF3 427 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 F8VZ95 297 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 PI4K2BG5E9Z4 385 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 H0YHG0 523 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 H7C0S8 307 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 PRRG2O14669 202 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 ZBTB43O43298 467 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 USO1O60763 962 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 SEC24DO94855 1032 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 TGDSO95455 350 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 HSPA4LO95757 839 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 APOA4P06727 396 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 HARSP12081 509 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 MTHFRP42898 656 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 NPTX2P47972 431 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 MCM2P49736 904 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 SLC16A1P53985 500 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 POLR2FP61218 127 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 UBXN1Q04323 297 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 EFEMP1Q12805 493 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 DUSP8Q13202 625 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 GRAPQ13588 217 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 SCARB2Q14108 478 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 OASLQ15646 514 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 MTHFSDQ2M296 383 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 WSCD2Q2TBF2 565 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 C3orf36Q3SXR2 165 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 C5orf22Q49AR2 442 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 SPDYCQ5MJ68 293 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 KLHDC10Q6PID8 442 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 GLB1LQ6UWU2 654 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 DSTYKQ6XUX3 929 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 APOBEC3FQ8IUX4 373 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 ZNF34Q8IZ26 560 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms