RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 KRT12Q99456 494 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 NAP1L3Q99457 506 aaPredicted RBP9.88□□□□□ -0.83
VTA1-201ENST00000367621 NCAPGQ9BPX3 1015 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 PLVAPQ9BX97 442 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 DDX47Q9H0S4 455 aaKnown RBP9.88□□□□□ -0.83
VTA1-201ENST00000367621 PCDH18Q9HCL0 1135 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 ALG13Q9NP73 1137 aaKnown RBP9.88□□□□□ -0.83
VTA1-201ENST00000367621 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 TMPRSS4Q9NRS4 437 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.88□□□□□ -0.83
VTA1-201ENST00000367621 MRPL17Q9NRX2 175 aaKnown RBP9.88□□□□□ -0.83
VTA1-201ENST00000367621 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.88□□□□□ -0.83
VTA1-201ENST00000367621 GMIPQ9P107 970 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 STK39Q9UEW8 545 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 DMGDHQ9UI17 866 aaKnown RBP9.88□□□□□ -0.83
VTA1-201ENST00000367621 FZD10Q9ULW2 581 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 LZTS1Q9Y250 596 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 EFR3BQ9Y2G0 817 aa9.88□□□□□ -0.83
VTA1-201ENST00000367621 CCDC188H7C350 402 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 RAD51CO43502 376 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 RTN3O95197 1032 aaPredicted RBP9.87□□□□□ -0.83
VTA1-201ENST00000367621 CXCL14O95715 111 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 YWHAQP27348 245 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 CTNNB1P35222 781 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 TUFMP49411 452 aaKnown RBP9.87□□□□□ -0.83
VTA1-201ENST00000367621 TAF10Q12962 218 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 CLUL1Q15846 466 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 DPYSL2Q16555 572 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 KCTD19Q17RG1 926 aaPredicted RBP9.87□□□□□ -0.83
VTA1-201ENST00000367621 MSANTD2Q6P1R3 559 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 SCYL2Q6P3W7 929 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 BBS12Q6ZW61 710 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 KLHL7Q8IXQ5 586 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 PYROXD2Q8N2H3 581 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 PQLC3Q8N755 202 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 KCTD6Q8NC69 237 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 SLC7A14Q8TBB6 771 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 C1orf54Q8WWF1 131 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 ANKRD7Q92527 254 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 CASP10Q92851 521 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 NTAN1Q96AB6 310 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 PARD6BQ9BYG5 372 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 DCLK3Q9C098 648 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 MTIF3Q9H2K0 278 aaKnown RBP9.87□□□□□ -0.83
VTA1-201ENST00000367621 FBXO44Q9H4M3 255 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 LRRC19Q9H756 370 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 ABCC13Q9NSE7 274 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 RRN3Q9NYV6 651 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 FBXW11Q9UKB1 542 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 RAB21Q9UL25 225 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 MAFFQ9ULX9 164 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 STAP1Q9ULZ2 295 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 YBX2Q9Y2T7 364 aaKnown RBP9.87□□□□□ -0.83
VTA1-201ENST00000367621 YIPF1Q9Y548 306 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 IRAK3Q9Y616 596 aa9.87□□□□□ -0.83
VTA1-201ENST00000367621 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 C2orf71A6NGG8 1288 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 HIDE1A8MVS5 230 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 ZNF487B1APH4 448 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 DYNC1I1O14576 645 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 TERTO14746 1132 aaKnown RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 CAPN9O14815 690 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 GRM6O15303 877 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 TGM5O43548 720 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 PHF2O75151 1096 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 ADRA1BP35368 520 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 COILP38432 576 aaPredicted RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 MMP16P51512 607 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 CDH6P55285 790 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 SLC7A5Q01650 507 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 CREMQ03060 361 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 DEUP1Q05D60 604 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 SCAPQ12770 1279 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 IFRD2Q12894 506 aaPredicted RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 SEMA3BQ13214 749 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 NME3Q13232 169 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 PDK2Q15119 407 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 GLE1Q53GS7 698 aaKnown RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 TFDP3Q5H9I0 405 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 SNX30Q5VWJ9 437 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 BTBD8Q5XKL5 378 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 VSIG1Q86XK7 387 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 PSTKQ8IV42 348 aaKnown RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 CCDC50Q8IVM0 306 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 MRPL43Q8N983 215 aaKnown RBP9.86□□□□□ -0.83
VTA1-201ENST00000367621 PCDH19Q8TAB3 1148 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 POF1BQ8WVV4 589 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 ATG4AQ8WYN0 398 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 FBXO32Q969P5 355 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 GDF15Q99988 308 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 SMOC2Q9H3U7 446 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 SLITRK6Q9H5Y7 841 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 CYP4F11Q9HBI6 524 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.86□□□□□ -0.83
VTA1-201ENST00000367621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.86□□□□□ -0.83
VTA1-201ENST00000367621 DDIT4Q9NX09 232 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 CLIC5Q9NZA1 410 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms