RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 GLMNQ92990 594 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 S100A13Q99584 98 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 DPY30Q9C005 99 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 FBXO28Q9NVF7 368 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 COMMD8Q9NX08 183 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 NCKIPSDQ9NZQ3 722 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 KRT75O95678 551 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 CCDC33Q8N5R6 958 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 KCNB2Q92953 911 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 MTFR1LQ9H019 292 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 CARD9Q9H257 536 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SETD4Q9NVD3 440 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SNTG2Q9NY99 539 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SH3BP4Q9P0V3 963 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 FXR1P51114 621 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 NR6A1Q15406 480 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 CYP2A13Q16696 494 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 GPR141Q7Z602 305 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 TERB1Q8NA31 727 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SH3GL3Q99963 347 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SLITRK2Q9H156 845 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 TRIM10Q9UDY6 481 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 CAPN1P07384 714 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 DSG1Q02413 1049 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 COX10Q12887 443 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 RALGDSQ12967 914 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TYW3Q6IPR3 259 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SPOCD1Q6ZMY3 1216 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SUSD6Q92537 303 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SAE1Q9UBE0 346 aaPredicted RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SAC3D1A6NKF1 404 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TRIM66O15016 1216 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 OR1E1P30953 314 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 PPP4CP60510 307 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 XRCC4Q13426 336 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TXNRD3Q86VQ6 643 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 ATG16L2Q8NAA4 619 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 MAGEC3Q8TD91 643 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 RNFT2Q96EX2 444 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 RBM22Q9NW64 420 aaKnown RBP eCLIP16.1■□□□□ 0.171e-6■■■■■ 28.1
NUCKS1-201ENST00000367142 TMEM51Q9NW97 253 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 VANGL2Q9ULK5 521 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 H3BRB1 525 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 IGF2BP3O00425 579 aaKnown RBP eCLIP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 ABCB1P08183 1280 aaPredicted RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 CYP11B1P15538 503 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 NUMBP49757 651 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 Q4G0T1 1027 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TDRD5Q8NAT2 981 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 RAD21L1Q9H4I0 556 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 C10orf88Q9H8K7 445 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SLC37A4O43826 429 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 GUCY1B2O75343 617 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 GNRH1P01148 92 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 ATP5BP06576 529 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 UBTFL6P0CB48 400 aaPredicted RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 CYP2F1P24903 491 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 FLT3P36888 993 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TUFMP49411 452 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 THOP1P52888 689 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 PTPN11Q06124 597 aaPredicted RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 VAC14Q08AM6 782 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 BOP1Q14137 746 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SLC29A2Q14542 456 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 PTGISQ16647 500 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SCAIQ8N9R8 606 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 PON1P27169 355 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 POLR2LP62875 67 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 TRIM32Q13049 653 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 MPP3Q13368 585 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 ERMARDQ5T6L9 678 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 CASP12Q6UXS9 341 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 ACER1Q8TDN7 264 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 GINS4Q9BRT9 223 aa16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
NUCKS1-201ENST00000367142 ITGB6P18564 788 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 MCL1Q07820 350 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 TRAF2Q12933 501 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 ZDHHC17Q8IUH5 632 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 COLGALT1Q8NBJ5 622 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 DNAJB3Q8WWF6 145 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 PANX3Q96QZ0 392 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 APOL2Q9BQE5 337 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 STARD13Q9Y3M8 1113 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 USP31Q70CQ4 1352 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 MAP3K6O95382 1288 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 UMPSP11172 480 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 PSMC3P17980 439 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 SREBF1P36956 1147 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 NFIL3Q16649 462 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 SETMARQ53H47 684 aaPredicted RBP16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 NOL9Q5SY16 702 aaKnown RBP16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 APBB2Q92870 758 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 INTS13Q9NVM9 706 aa16.09■□□□□ 0.17
NUCKS1-201ENST00000367142 PHTF1Q9UMS5 762 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms