RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PCOLCEQ15113 449 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 RAB30Q15771 203 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 UAP1L1Q3KQV9 507 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 PRR16Q569H4 304 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 FAM26FQ5R3K3 315 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 LCE4AQ5TA78 99 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 UTP14CQ5TAP6 766 aaKnown RBP8.62□□□□□ -1.03
YBX3-204ENST00000366290 PPP4R3AQ6IN85 833 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 B3GNT9Q6UX72 402 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 PIK3AP1Q6ZUJ8 805 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 EPM2AIP1Q7L775 607 aaPredicted RBP8.62□□□□□ -1.03
YBX3-204ENST00000366290 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 UNC5BQ8IZJ1 945 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 KLHL36Q8N4N3 616 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 LINC01356Q8N9X3 169 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 TBCKQ8TEA7 893 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 GLG1Q92896 1179 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 TNPO1Q92973 898 aaKnown RBP8.62□□□□□ -1.03
YBX3-204ENST00000366290 GFM2Q969S9 779 aaKnown RBP8.62□□□□□ -1.03
YBX3-204ENST00000366290 RELTQ969Z4 430 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 TIFAQ96CG3 184 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 LRGUKQ96M69 825 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 ZNF577Q9BSK1 485 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 FOXP1Q9H334 677 aaPredicted RBP8.62□□□□□ -1.03
YBX3-204ENST00000366290 AZI2Q9H6S1 392 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 GOLGA6AQ9NYA3 693 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 ADAM29Q9UKF5 820 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 DNM3Q9UQ16 869 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 LOXHD1Q8IVV2 1947 aa8.62□□□□□ -1.03
YBX3-204ENST00000366290 COL1A2P08123 1366 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 CCDC194A0A1B0GVG4 234 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ABHD14A-ACY1A0A1B0GW23 586 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 C9orf118A6NHY6 69 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 RSPH10B2B2RC85 870 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 STX6O43752 255 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 PSMD10O75832 226 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 TDP2O95551 362 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 RSPH10BP0C881 870 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ZNF888P0CJ79 500 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 GAAP10253 952 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 INSRRP14616 1297 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 PDCP20941 246 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 LPOP22079 712 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 MRE11P49959 708 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 TOB1P50616 345 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 RRADP55042 308 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 RESTQ13127 1097 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ADAM15Q13444 863 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 GTF2H3Q13889 308 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 NONOQ15233 471 aaKnown RBP eCLIP8.61□□□□□ -1.03
YBX3-204ENST00000366290 SAFBQ15424 915 aaKnown RBP eCLIP8.61□□□□□ -1.03
YBX3-204ENST00000366290 VMACQ2NL98 169 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 FAM43BQ6ZT52 329 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 GPR155Q7Z3F1 870 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 TMEM151BQ8IW70 566 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 CCDC60Q8IWA6 550 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 TP53I13Q8NBR0 393 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 PIK3C3Q8NEB9 887 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ZSCAN18Q8TBC5 510 aaPredicted RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 ETNPPLQ8TBG4 499 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ATP8B4Q8TF62 1192 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 NRG4Q8WWG1 115 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 CLIP3Q96DZ5 547 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ADI1Q9BV57 179 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 GEMIN8Q9NWZ8 242 aaKnown RBP8.61□□□□□ -1.03
YBX3-204ENST00000366290 TUBE1Q9UJT0 475 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 ZDHHC9Q9Y397 364 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 PCDHA10Q9Y5I2 948 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 SQORQ9Y6N5 450 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 TTC3P53804 2025 aa8.61□□□□□ -1.03
YBX3-204ENST00000366290 BRWD1Q9NSI6 2320 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 IGSF9BQ9UPX0 1349 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 H3BQV1 296 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 DAPK3O43293 454 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 SLC37A4O43826 429 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 HBP1O60381 514 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 CHRNA1P02708 482 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 LTA4HP09960 611 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 GCFC2P16383 781 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 MARK3P27448 753 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 SFNP31947 248 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 WDR5P61964 334 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 MEF2AQ02078 507 aaPredicted RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 PPP3CAQ08209 521 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 MGAT3Q09327 533 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 USP10Q14694 798 aaKnown RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 TCTN1Q2MV58 587 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 FAM160B1Q5W0V3 765 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 MIS18BP1Q6P0N0 1132 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 NEK8Q86SG6 692 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 CLEC14AQ86T13 490 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 RSPH3Q86UC2 560 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 ZNF761Q86XN6 746 aaPredicted RBP8.6□□□□□ -1.03
YBX3-204ENST00000366290 RDM1Q8NG50 284 aa8.6□□□□□ -1.03
YBX3-204ENST00000366290 RIN2Q8WYP3 895 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms