RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KCNK10P57789 538 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 FAM83EQ2M2I3 478 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 RGS21Q2M5E4 152 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 PCDH20Q8N6Y1 951 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 ENDOVQ8N8Q3 282 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SIK2Q9H0K1 926 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 STN1Q9H668 368 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC189A1A4V9 331 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SPDYE16A6NNV3 312 aaPredicted RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC166P0CW27 439 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 ACTR3P61158 418 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 BBS12Q6ZW61 710 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 MBOAT7Q96N66 472 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 RNPEPQ9H4A4 650 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 CYP4F12Q9HCS2 524 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SSU72Q9NP77 194 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 CROTQ9UKG9 612 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 HBS1LQ9Y450 684 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 CHADO15335 359 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 BIRC5O15392 142 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 MAGEB2O15479 319 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SUPT7LO94864 414 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 NME5P56597 212 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 RBP5P82980 135 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 DMPKQ09013 629 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 KCTD2Q14681 263 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 ZBTB46Q86UZ6 589 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 MAP4K3Q8IVH8 894 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 RDM1Q8NG50 284 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 GLMNQ92990 594 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 TSPAN17Q96FV3 270 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 ACOT9Q9Y305 439 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 TPP1O14773 563 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 HUS1O60921 280 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 RARBP10826 455 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 NANOGNBQ7Z5D8 188 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SLC44A1Q8WWI5 657 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 SEC14L1Q92503 715 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 C7orf26Q96N11 449 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 BTBD9Q96Q07 612 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 IARS2Q9NSE4 1012 aaKnown RBP16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 PLLPQ9Y342 182 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 EEF2KO00418 725 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 NFIBO00712 420 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 PHGDHO43175 533 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 BPGMP07738 259 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 NOMO3P69849 1222 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 SPP2Q13103 211 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 DHRSXQ8N5I4 330 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 SLC7A8Q9UHI5 535 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 RGSL1A5PLK6 1076 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 PSMD10O75832 226 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 MSX2P35548 267 aaPredicted RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 GRIK5Q16478 980 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 RC3H1Q5TC82 1133 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 CATSPER4Q7RTX7 472 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 LRRC15Q8TF66 581 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 SCN3BQ9NY72 215 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 CDH22Q9UJ99 828 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 NFAT5O94916 1531 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 KANSL1LA0AUZ9 987 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 CYP3A4P08684 503 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 VIL1P09327 827 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 ANKS1BQ7Z6G8 1248 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 COLGALT1Q8NBJ5 622 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 PLEKHG4BQ96PX9 1271 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 CHST12Q9NRB3 414 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 VTI1BQ9UEU0 232 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 RABGEF1Q9UJ41 708 aa16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
CLSTN1-201ENST00000361311 MRASO14807 208 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 ENTPD3O75355 529 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 MTA2O94776 668 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 PIGNO95427 931 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 BFSP2Q13515 415 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 MPP2Q14168 576 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 FUT11Q495W5 492 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 CDCA2Q69YH5 1023 aaPredicted RBP16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 CES3Q6UWW8 571 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 SEMA4DQ92854 862 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 ASPSCR1Q9BZE9 553 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 PNPLA3Q9NST1 481 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC167Q9P0B6 97 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.22
CLSTN1-201ENST00000361311 UBA6A0AVT1 1052 aaPredicted RBP16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 M0R2N6 131 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 OGTO15294 1046 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 FCGR1AP12314 374 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 MGAT1P26572 445 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 MAPK11Q15759 364 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 OTUD3Q5T2D3 398 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms