RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 HDAC4P56524 1084 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 NFE2Q16621 373 aaPredicted RBP20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 CYP20A1Q6UW02 462 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 CXorf40AQ8TE69 158 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 CHUKO15111 745 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 BMPR2Q13873 1038 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 A1CFQ9NQ94 594 aaKnown RBP20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 PTPAQ15257 358 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 LRRC23Q53EV4 343 aaPredicted RBP20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 LUZP2Q86TE4 346 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZNF189O75820 626 aaPredicted RBP20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 FEN1P39748 380 aaKnown RBP20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 PLA2G4EQ3MJ16 856 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 WDR27A2RRH5 827 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 RBAK-RBAKDNI3L0D1 243 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 DNAJC3Q13217 504 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 TMEM159Q96B96 161 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 TPD52L3Q96J77 140 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 NMRK1Q9NWW6 199 aa20.83■□□□□ 0.92
CDC42BPB-201ENST00000361246 SDR42E2A6NKP2 422 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 XPO1O14980 1071 aaKnown RBP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 C4orf19Q8IY42 314 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 KIAA0319LQ8IZA0 1049 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 IL1RAPL1Q9NZN1 696 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 DNAJC16Q9Y2G8 782 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 RNF103O00237 685 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 CLDN5O00501 218 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 NETO2Q8NC67 525 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 MRPL9Q9BYD2 267 aaKnown RBP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 ACTR8Q9H981 624 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 A0A087X0T9 212 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 FBXO21O94952 628 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 FAM228BP0C875 321 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 SLC26A2P50443 739 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 SEC13P55735 322 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 RALGDSQ12967 914 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 IGSF6O95976 241 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 YBX3P16989 372 aaKnown RBP eCLIP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 SENP8Q96LD8 212 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 AKAP7Q9P0M2 348 aaPredicted RBP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 PFKPQ01813 784 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 CENPCQ03188 943 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 ELAVL2Q12926 359 aaKnown RBP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 MAP3K14Q99558 947 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 BBS2Q9BXC9 721 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 PRKAB1Q9Y478 270 aa20.82■□□□□ 0.92
CDC42BPB-201ENST00000361246 SCAMP1O15126 338 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 PSTPIP1O43586 416 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 AKAP3O75969 853 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 PPIL2Q13356 520 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 IQSEC1Q6DN90 963 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 CLYBLQ8N0X4 340 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 DEFB106AQ8N104 65 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 ERP27Q96DN0 273 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 KCNF1Q9H3M0 494 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 ASAH2Q9NR71 780 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 SMG5Q9UPR3 1016 aaKnown RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 SLC9A8Q9Y2E8 581 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 B2RBV5 119 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 TRIM66O15016 1216 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 F9P00740 461 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 C21orf59P57076 290 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 FGD2Q7Z6J4 655 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 IPCEF1Q8WWN9 437 aaPredicted RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 CDK5RAP1Q96SZ6 601 aaKnown RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 DISP2A7MBM2 1401 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 TMEM88BA6NKF7 163 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 USP12O75317 370 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 MRPS6P82932 125 aaKnown RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 MAB21L3Q8N8X9 362 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 MKNK1Q9BUB5 465 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 UXTQ9UBK9 157 aaPredicted RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 CTNNAL1Q9UBT7 734 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 PRR23D1E9PI22 279 aaPredicted RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 FYNP06241 537 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 PRR23D2P0DMB1 279 aaPredicted RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 TOB1P50616 345 aaPredicted RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 CAPRIN2Q6IMN6 1127 aaKnown RBP20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 PARGQ86W56 976 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 OR10G6Q8NH81 332 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 TRPC4APQ8TEL6 797 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 VPS9D1Q9Y2B5 631 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 SSU72P8A0A1W2PR75 194 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 BBS7Q8IWZ6 715 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZBTB10Q96DT7 871 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 ELOVL6Q9H5J4 265 aa20.81■□□□□ 0.92
CDC42BPB-201ENST00000361246 SV2AQ7L0J3 742 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 LENG1Q96BZ8 264 aaPredicted RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 GAKO14976 1311 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 CHURC1-FNTBB4DL54 471 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 IFNA16P05015 189 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 HNF4AP41235 474 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 SERPINB8P50452 374 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 DDR2Q16832 855 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 CELF3Q5SZQ8 465 aaKnown RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 TRIM69Q86WT6 500 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 SLC13A5Q86YT5 568 aaPredicted RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 ARID3BQ8IVW6 561 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms