RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CCDC90BQ9GZT6 254 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 ABHD16BQ9H3Z7 469 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 A0A096LPK6 155 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 PDHXO00330 501 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 TRDMT1O14717 391 aaKnown RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 TPST1O60507 370 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 HMOX2P30519 316 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 DSG1Q02413 1049 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 WNK4Q96J92 1243 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 TSPYL2Q9H2G4 693 aaPredicted RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 EFCAB1Q9HAE3 211 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 RBM22Q9NW64 420 aaKnown RBP eCLIP16.8■□□□□ 0.284e-7■■□□□ 11.6
SCAF1-201ENST00000360565 ABCC6O95255 1503 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 TRPC5OSA6NMA1 111 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 NCAM2O15394 837 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 SRP72O76094 671 aaKnown RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 STX5Q13190 355 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 PDPK2PQ6A1A2 396 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 TBC1D10AQ9BXI6 508 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 XPNPEP1Q9NQW7 623 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 SAR1AQ9NR31 198 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 LATS2Q9NRM7 1088 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 CHADO15335 359 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 MT-CO1P00395 513 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 LBRQ14739 615 aaKnown RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 RNF219Q5W0B1 726 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 GPC2Q8N158 579 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 USP6NLQ92738 828 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 CACYBPQ9HB71 228 aaKnown RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 SLC8A2Q9UPR5 921 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 DTNAQ9Y4J8 743 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 ZC3H4Q9UPT8 1303 aaKnown RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 STRNO43815 780 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 PEX10O60683 326 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 AVILO75366 819 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 FARP2O94887 1054 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 ATP6V1B1P15313 513 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 TFE3P19532 575 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 DYNC1I2Q13409 638 aaKnown RBP16.79■□□□□ 0.28
SCAF1-201ENST00000360565 MON1BQ7L1V2 547 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 STK32AQ8WU08 396 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 KAT2BQ92831 832 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 ZBTB10Q96DT7 871 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 CCDC134Q9H6E4 229 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 SOX13Q9UN79 622 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 FAM237BA0A1B0GVD1 139 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 DNAJC6O75061 913 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 PTGIRP43119 386 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 CSHL1Q14406 222 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 IZUMO2Q6UXV1 221 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 ZNF410Q86VK4 478 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 TEKT4Q8WW24 435 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 CPXM1Q96SM3 734 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
SCAF1-201ENST00000360565 MAGEA13PA6NCF6 341 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 TRIM13O60858 407 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 PYGLP06737 847 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 ABCE1P61221 599 aaKnown RBP16.78■□□□□ 0.28
SCAF1-201ENST00000360565 ATXN3LQ9H3M9 355 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 TCF7L2Q9NQB0 619 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 MRGBPQ9NV56 204 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 STXBP5LQ9Y2K9 1186 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 ADGRA2Q96PE1 1338 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 TULP2O00295 520 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 RHOBTB1O94844 696 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 HOXD13P35453 343 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 ARHGDIAP52565 204 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 SLC20A2Q08357 652 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 LAMB3Q13751 1172 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 TDRD5Q8NAT2 981 aaKnown RBP16.78■□□□□ 0.28
SCAF1-201ENST00000360565 TRPM4Q8TD43 1214 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 SNX19Q92543 992 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 KLRG1Q96E93 195 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
SCAF1-201ENST00000360565 NCKIPSDQ9NZQ3 722 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 ERVK-10P10266 1014 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 PGAM1P18669 254 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 CHRM3P20309 590 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 JAG1P78504 1218 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 CDH17Q12864 832 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 NRDE2Q9H7Z3 1164 aa16.78■□□□□ 0.28
SCAF1-201ENST00000360565 TCRBV9S1A1TA0A576 114 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 MEI4A8MW99 385 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 GPR182O15218 404 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 POMCP01189 267 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 SLC2A3P11169 496 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 CREB1P16220 341 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 BTKQ06187 659 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 BST1Q10588 318 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 KPNB1Q14974 876 aaKnown RBP16.77■□□□□ 0.28
SCAF1-201ENST00000360565 PLPPR4Q7Z2D5 763 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 KCNMB4Q86W47 210 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 INPP5DQ92835 1189 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 TRIM54Q9BYV2 358 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms