RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 FAM131BQ86XD5 332 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 VPS52Q8N1B4 723 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 C3orf58Q8NDZ4 430 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 LRRC39Q96DD0 335 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 PGBD4Q96DM1 585 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 SMARCD1Q96GM5 515 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 OLFM3Q96PB7 478 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 SLC9A7Q96T83 725 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 CYTH2Q99418 400 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 PAFAH2Q99487 392 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 PNPLA8Q9NP80 782 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 PADI3Q9ULW8 664 aa15.43■□□□□ 0.06
GABPB1-202ENST00000359031 FRMPD3Q5JV73 1810 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 TCP11X1B4DZS4 312 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 CPP00450 1065 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 GSTA2P09210 222 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 GOT1P17174 413 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 CD52P31358 61 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 MSH2P43246 934 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 DEUP1Q05D60 604 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 GRIK3Q13003 919 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 EFTUD2Q15029 972 aaKnown RBP eCLIP15.42■□□□□ 0.061e-5■□□□□ 9
GABPB1-202ENST00000359031 MTFR1Q15390 333 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 RAB41Q5JT25 222 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 HEATR6Q6AI08 1181 aaKnown RBP15.42■□□□□ 0.06
GABPB1-202ENST00000359031 CCSAPQ6IQ19 270 aaPredicted RBP15.42■□□□□ 0.06
GABPB1-202ENST00000359031 KCNT2Q6UVM3 1135 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 RAET1EQ8TD07 263 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 RNF139Q8WU17 664 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 PCED1BQ96HM7 432 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 SMOQ99835 787 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 HTATIP2Q9BUP3 242 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 ULBP1Q9BZM6 244 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 ACTR5Q9H9F9 607 aaPredicted RBP15.42■□□□□ 0.06
GABPB1-202ENST00000359031 RRN3Q9NYV6 651 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 DTLQ9NZJ0 730 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 CACNG4Q9UBN1 327 aa15.42■□□□□ 0.06
GABPB1-202ENST00000359031 CASTOR2A6NHX0 329 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 KBTBD13C9JR72 458 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 M0QYT0 321 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 DGKIO75912 1065 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 FSBPO95073 299 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 OAS1P00973 400 aaKnown RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 GHRP10912 638 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 AMPD1P23109 780 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 HOXD10P28358 340 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 AFF1P51825 1210 aaKnown RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 SLC10A2Q12908 348 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 TRIM32Q13049 653 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 PTK7Q13308 1070 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 SPARCL1Q14515 664 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 KCNA10Q16322 511 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 FAM26DQ5JW98 314 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 METTL23Q86XA0 190 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 GDAP1Q8TB36 358 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 CCDC110Q8TBZ0 833 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 TFB1MQ8WVM0 346 aaKnown RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 NDRG1Q92597 394 aaKnown RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 UROC1Q96N76 676 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
GABPB1-202ENST00000359031 ETNK1Q9HBU6 452 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 ARHGEF4Q9NR80 690 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 DSEQ9UL01 958 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 SQORQ9Y6N5 450 aa15.41■□□□□ 0.06
GABPB1-202ENST00000359031 PTPRDP23468 1912 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 A0A0U1RQF3 1178 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 ARHGEF37A1IGU5 675 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 MYBPHLA2RUH7 354 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 SNX3O60493 162 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 MGEA5O60502 916 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 MAP3K6O95382 1288 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 ASMTLO95671 621 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 CYP11A1P05108 521 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 IGFBP6P24592 240 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-202ENST00000359031 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-202ENST00000359031 NDUFV1P49821 464 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 SCAPQ12770 1279 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 SEMA5AQ13591 1074 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 ZMIZ2Q8NF64 920 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 DCAKDQ8WVC6 231 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 ALKBH8Q96BT7 664 aaKnown RBP15.4■□□□□ 0.06
GABPB1-202ENST00000359031 PGAP3Q96FM1 320 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-202ENST00000359031 ELAC2Q9BQ52 826 aaKnown RBP15.4■□□□□ 0.06
GABPB1-202ENST00000359031 FERMT1Q9BQL6 677 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 KDM4CQ9H3R0 1056 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
GABPB1-202ENST00000359031 A0A0A0MRY4 1105 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 IQANK1A0A1B0GTG1 560 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 TCRBV9S1A1TA0A576 114 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 NRP1O14786 923 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 CAPN9O14815 690 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 TYROBPO43914 113 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 MFSD11O43934 449 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 SPAG7O75391 227 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 CABYRO75952 493 aa15.39■□□□□ 0.05
GABPB1-202ENST00000359031 STK10O94804 968 aaKnown RBP15.39■□□□□ 0.05
GABPB1-202ENST00000359031 ZWINTO95229 277 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms