RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PPTC7Q8NI37 304 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 CSPG4P5Q96PW8 444 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 MAGEB5Q9BZ81 275 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 WWP1Q9H0M0 922 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SNTG2Q9NY99 539 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 STOML1Q9UBI4 398 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 MFHAS1Q9Y4C4 1052 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 LRRC42Q9Y546 428 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 PCDHA11Q9Y5I1 949 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 COL1A2P08123 1366 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 HMX2A2RU54 273 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SKAP2O75563 359 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 KRT36O76013 467 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 RARBP10826 455 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 PTPN9P43378 593 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 NR2C2P49116 596 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SERPINB9P50453 376 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 IRX4P78413 519 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 BLMHQ13867 455 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 KIZQ2M2Z5 673 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 DCAF4L1Q3SXM0 396 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ZCCHC23Q6ZST2 131 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 STMN2Q93045 179 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 C18orf25Q96B23 403 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 OSBPL1AQ9BXW6 950 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 TRIM6Q9C030 488 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 MMADHCQ9H3L0 296 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 ARHGEF4Q9NR80 690 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 DTLQ9NZJ0 730 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 HBS1LQ9Y450 684 aaKnown RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 HES2Q9Y543 173 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SMNDC1O75940 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
RFX3-202ENST00000358730 DDNO94850 711 aaPredicted RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 BPGMP07738 259 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 VAV1P15498 845 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 ATP6V1C1P21283 382 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 CRHR1P34998 444 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 ADCYAP1R1P41586 468 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 BCAT1P54687 386 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 AQP5P55064 265 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 CRADDP78560 199 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 TMEM62Q0P6H9 643 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SEMA5AQ13591 1074 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SOWAHAQ2M3V2 549 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 FAM91A1Q658Y4 838 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 NCBP2-AS2Q69YL0 99 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 TAPT1Q6NXT6 567 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SLC26A9Q7LBE3 791 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 UNC5BQ8IZJ1 945 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 ARHGAP24Q8N264 748 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 PDCD7Q8N8D1 485 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 SMC1BQ8NDV3 1235 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 STKLD1Q8NE28 680 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 NLGN2Q8NFZ4 835 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 PPP1R14CQ8TAE6 165 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 WDR60Q8WVS4 1066 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 DNAJC9Q8WXX5 260 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 OPTNQ96CV9 577 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SNX27Q96L92 541 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 RNF19AQ9NV58 838 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 NMRK1Q9NWW6 199 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 MTMR10Q9NXD2 777 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SLC17A6Q9P2U8 582 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 WDR27A2RRH5 827 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 H3BRB1 525 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 CAPN9O14815 690 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 LIN7AO14910 233 aaPredicted RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 NVLO15381 856 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 GOT1P17174 413 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 AMPD1P23109 780 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 HOXD11P31277 338 aaPredicted RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 PGM1P36871 562 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SARNPP82979 210 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 BST2Q10589 180 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 SMAD1Q15797 465 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 GRIK4Q16099 956 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 ARHGAP17Q68EM7 881 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 TREML1Q86YW5 311 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 PYROXD2Q8N2H3 581 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 BEST2Q8NFU1 509 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 HTR3CQ8WXA8 447 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 SPDL1Q96EA4 605 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 FAM161BQ96MY7 647 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 RILPQ96NA2 401 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 C16orf70Q9BSU1 422 aa8.87□□□□□ -0.99
RFX3-202ENST00000358730 C11orf84Q9BUA3 381 aaPredicted RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 TUT1Q9H6E5 874 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 PIH1D1Q9NWS0 290 aaKnown RBP8.87□□□□□ -0.99
RFX3-202ENST00000358730 ZNF638Q14966 1978 aaKnown RBP8.86□□□□□ -0.99
RFX3-202ENST00000358730 A0A0A0MRY4 1105 aa8.86□□□□□ -0.99
RFX3-202ENST00000358730 CAPN14A8MX76 684 aa8.86□□□□□ -0.99
RFX3-202ENST00000358730 B2RBV5 119 aa8.86□□□□□ -0.99
RFX3-202ENST00000358730 SNNO75324 88 aaPredicted RBP8.86□□□□□ -0.99
RFX3-202ENST00000358730 TOMM70O94826 608 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms