RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 CCDC33Q8N5R6 958 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 HNRNPLLQ8WVV9 542 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SLC35C1Q96A29 364 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 C6orf203Q9P0P8 240 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 AKAP12Q02952 1782 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 MYO1GB0I1T2 1018 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 TSPAN3O60637 253 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 NPY2RP49146 381 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 CDH8P55286 799 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 CLEC4FQ8N1N0 589 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 LPCAT1Q8NF37 534 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ACTL9Q8TC94 416 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 HTR3CQ8WXA8 447 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 KRCC1Q9NPI7 259 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 H2AFY2Q9P0M6 372 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 GLTPD2A6NH11 291 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 FAM110CQ1W6H9 321 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 FNDC3BQ53EP0 1204 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 LRRC8BQ6P9F7 803 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 FIBCD1Q8N539 461 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 COPS5Q92905 334 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ACO2Q99798 780 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ECSITQ9BQ95 431 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SLC24A2Q9UI40 661 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SLCO1B7G3V0H7 640 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 RPN2P04844 631 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 CYP2A7P20853 494 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SCNN1GP51170 649 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 MGAT5Q09328 741 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SLC26A11Q86WA9 606 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 FAM111AQ96PZ2 611 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 OSGEPL1Q9H4B0 414 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SMPD4Q9NXE4 827 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 MARCH2Q9P0N8 246 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 DNMT3LQ9UJW3 386 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 APPL1Q9UKG1 709 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 GIT1Q9Y2X7 761 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 DUSP10Q9Y6W6 482 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ANKRD63C9JTQ0 380 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 CAND2O75155 1236 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 PTPN3P26045 913 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 LSP1P33241 339 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 NOS2P35228 1153 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 PPP1R16AQ96I34 528 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 UBA2Q9UBT2 640 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 LOC102724159A0A0B4J2E5 919 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ZBTB39O15060 712 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ZBTB48P10074 688 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 NPR3P17342 541 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 PRIM2P49643 509 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 PWP2Q15269 919 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SPANXN3Q5MJ09 141 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 RFX8Q6ZV50 586 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 TRPM8Q7Z2W7 1104 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SEC16BQ96JE7 1060 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 WDR41Q9HAD4 459 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 GPAMQ9HCL2 828 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ZCCHC17Q9NP64 241 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 ACOT9Q9Y305 439 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 C2CD2Q9Y426 696 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 C16orf96A6NNT2 1141 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 TPBGLP0DKB5 382 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 RTP1P59025 263 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 E2F4Q16254 413 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 TUBGCP3Q96CW5 907 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SGF29Q96ES7 293 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 SEPT3Q9UH03 358 aa10.61□□□□□ -0.71
SPTAN1-201ENST00000358161 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 YBX3P16989 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 ZNF7P17097 686 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 BTKQ06187 659 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 BCL2L1Q07817 233 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 USP41Q3LFD5 358 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 LONP2Q86WA8 852 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 TKTL2Q9H0I9 626 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 ASAH2Q9NR71 780 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 BLOC1S6Q9UL45 172 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 SIGLEC1Q9BZZ2 1709 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 NCF1BA6NI72 391 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 NCF1CA8MVU1 366 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 NCF1P14598 390 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 CTNNB1P35222 781 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 ERP27Q96DN0 273 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 CELF6Q96J87 481 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 APOL2Q9BQE5 337 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 CTNNAL1Q9UBT7 734 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 PCDHA3Q9Y5H8 950 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 CCNG1P51959 295 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 PTENP60484 403 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 TREML2Q5T2D2 321 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 GRTP1Q5TC63 336 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 ANKS6Q68DC2 871 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 KIAA0319LQ8IZA0 1049 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 OLFM3Q96PB7 478 aa10.6□□□□□ -0.71
SPTAN1-201ENST00000358161 IFNEQ86WN2 208 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms