RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 PDK2Q15119 407 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 POU5F2Q8N7G0 328 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 RBM15BQ8NDT2 890 aaKnown RBP21.14■□□□□ 0.97
COL13A1-202ENST00000357811 STMN2Q93045 179 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 PHACTR1Q9C0D0 580 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 ACSS2Q9NR19 701 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 ARHGEF4Q9NR80 690 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 PSAT1Q9Y617 370 aa21.14■□□□□ 0.97
COL13A1-202ENST00000357811 ITM2AO43736 263 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 L1CAMP32004 1257 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 INCA1Q0VD86 236 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 HEATR6Q6AI08 1181 aaKnown RBP21.13■□□□□ 0.97
COL13A1-202ENST00000357811 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 CCNYQ8ND76 341 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 GJD2Q9UKL4 321 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.13■□□□□ 0.97
COL13A1-202ENST00000357811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.13■□□□□ 0.97
COL13A1-202ENST00000357811 PRR5-ARHGAP8B1AHC4 643 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 SMAPO00193 183 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 USP12O75317 370 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 KRT38O76015 456 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 CALRP27797 417 aaKnown RBP21.13■□□□□ 0.97
COL13A1-202ENST00000357811 ARHGAP8P85298 464 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 AP1B1Q10567 949 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 PPM1JQ5JR12 505 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 SLC9A4Q6AI14 798 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 ADGRF2Q8IZF7 708 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 SMC1BQ8NDV3 1235 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 FBXO41Q8TF61 875 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 KCTD15Q96SI1 283 aaPredicted RBP21.13■□□□□ 0.97
COL13A1-202ENST00000357811 EBNA1BP2Q99848 306 aaKnown RBP21.13■□□□□ 0.97
COL13A1-202ENST00000357811 TLE6Q9H808 572 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 CDHR5Q9HBB8 845 aa21.13■□□□□ 0.97
COL13A1-202ENST00000357811 SMNDC1O75940 238 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 TGM2P21980 687 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 LGSNQ5TDP6 509 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 RSPH3Q86UC2 560 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 HACE1Q8IYU2 909 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 SLC35F5Q8WV83 523 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 AGAP3Q96P47 875 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 ITGA11Q9UKX5 1188 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 LRRC42Q9Y546 428 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 PAPPA2Q9BXP8 1791 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 NVLO15381 856 aaKnown RBP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 CREB3O43889 395 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 SPAG6O75602 509 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 VAV1P15498 845 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 ENDOVQ8N8Q3 282 aaKnown RBP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 STKLD1Q8NE28 680 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 GSDMBQ8TAX9 411 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 AGR3Q8TD06 166 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 CSPG4P5Q96PW8 444 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 ZNF358Q9NW07 568 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 DTLQ9NZJ0 730 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 BCLAF3A2AJT9 711 aaKnown RBP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 RARBP10826 455 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 PRKCHP24723 683 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 BLMHQ13867 455 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 CRLF3Q8IUI8 442 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 SCG3Q8WXD2 468 aaKnown RBP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 DCPSQ96C86 337 aaKnown RBP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 TBCBQ99426 244 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 PPP1R12CQ9BZL4 782 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 SETD4Q9NVD3 440 aa21.12■□□□□ 0.97
COL13A1-202ENST00000357811 MRPL42Q9Y6G3 142 aaKnown RBP21.12■□□□□ 0.97
COL13A1-202ENST00000357811 A0A0G2JLL6 359 aaPredicted RBP21.11■□□□□ 0.97
COL13A1-202ENST00000357811 CCDC78A2IDD5 438 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 DPPA5A6NC42 116 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 MGAT1P26572 445 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 PRRT2Q7Z6L0 340 aaPredicted RBP21.11■□□□□ 0.97
COL13A1-202ENST00000357811 NME8Q8N427 588 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 EFCAB3Q8N7B9 438 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 USP6NLQ92738 828 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 NXF3Q9H4D5 531 aaKnown RBP21.11■□□□□ 0.97
COL13A1-202ENST00000357811 CACNG4Q9UBN1 327 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 ENO4A6NNW6 628 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 CCNG1P51959 295 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 PEX6Q13608 980 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 MOCOSQ96EN8 888 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 TTC1Q99614 292 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 BATF3Q9NR55 127 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 MTMR10Q9NXD2 777 aa21.11■□□□□ 0.97
COL13A1-202ENST00000357811 H3BRB1 525 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 TGDSO95455 350 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 PSMG1O95456 288 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 BAG2O95816 211 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 MLH1P40692 756 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 STX3Q13277 289 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 FASTKD1Q53R41 847 aaKnown RBP21.1■□□□□ 0.97
COL13A1-202ENST00000357811 VWA5B1Q5TIE3 1220 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 MTHFD1LQ6UB35 978 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 CFAP61Q8NHU2 1237 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 ADAM32Q8TC27 787 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 TUT1Q9H6E5 874 aaKnown RBP21.1■□□□□ 0.97
COL13A1-202ENST00000357811 STOML1Q9UBI4 398 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 DNAJC25-GNG10A0A024R161 153 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 KCNK1O00180 336 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 TPP1O14773 563 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms