RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 NAT9Q9BTE0 207 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 TBCDQ9BTW9 1192 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 MTA2O94776 668 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 CTSEP14091 401 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 UQCRBP14927 111 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 EXOSC10Q01780 885 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 LGALS3BPQ08380 585 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 R3HCC1LQ7Z5L2 792 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 HMG20AQ9NP66 347 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 PIK3CDO00329 1044 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 FOXN1O15353 648 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 CLPTM1O96005 669 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 NR3C2P08235 984 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 ITGA3P26006 1051 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 TCF7P36402 384 aaPredicted RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 TAF8Q7Z7C8 310 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 ISCUQ9H1K1 167 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 GSG1L2A8MUP6 293 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 TBX3O15119 743 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 SLC25A12O75746 678 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 MPP3Q13368 585 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 PACS1Q6VY07 963 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 GLT6D1Q7Z4J2 308 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 GGA3Q9NZ52 723 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 DNAJC16Q9Y2G8 782 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 BAIAP3O94812 1187 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 TMEM253P0C7T8 217 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 RPL10AP62906 217 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 OASLQ15646 514 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 TMC7Q7Z402 723 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 CCDC185Q8N715 623 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 SLC29A2Q14542 456 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 SP8Q8IXZ3 490 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 MAGEB18Q96M61 343 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 ZIM3Q96PE6 472 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 SLC40A1Q9NP59 571 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 VTI1BQ9UEU0 232 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 LYVE1Q9Y5Y7 322 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 CALB2P22676 271 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 PDK2Q15119 407 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 OTUD3Q5T2D3 398 aaPredicted RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 COLGALT2Q8IYK4 626 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 FICDQ9BVA6 458 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 POLR1BQ9H9Y6 1135 aa5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 SAE1Q9UBE0 346 aaPredicted RBP5.93□□□□□ -1.46
SRGAP1-201ENST00000355086 NUMA1Q14980 2115 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MFSD1Q9H3U5 465 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PRR12Q9ULL5 1215 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 ZNF608Q9ULD9 1512 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 DCDC2CA8MYV0 355 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 LHX1P48742 406 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 CTXN3Q4LDR2 81 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 COL23A1Q86Y22 540 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 GANQ9H2C0 597 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 C17orf75Q9HAS0 396 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 C1orf232A0A0U1RR37 186 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 COPZ1P61923 177 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MAGEC3Q8TD91 643 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 CASTOR2A6NHX0 329 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 BCAT1P54687 386 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PUDPQ08623 228 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 ACOT1Q86TX2 421 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MTMR12Q9C0I1 747 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 TSPAN19P0C672 248 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 VDRP11473 427 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MYL4P12829 197 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 KLK7P49862 253 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 SRP54P61011 504 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PTAR1Q7Z6K3 402 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 ZCCHC7Q8N3Z6 543 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MIEF2Q96C03 454 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 REPS1Q96D71 796 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MCRS1Q96EZ8 462 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 COMMD9Q9P000 198 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 LIMD1Q9UGP4 676 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 HAO1Q9UJM8 370 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 F9P00740 461 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 ATP1A4Q13733 1029 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PROX1Q92786 737 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 SPON1Q9HCB6 807 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MAPKBP1O60336 1514 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 NQO1P15559 274 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 CHRNA5P30532 468 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 CENPIQ92674 756 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 RORBQ92753 470 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 COPG2Q9UBF2 871 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PRMT3O60678 531 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PDHBP11177 359 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PLD1Q13393 1074 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 FAM220AQ7Z4H9 259 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 CPB2Q96IY4 423 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 MXRA8Q9BRK3 442 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 RHBGQ9H310 441 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 VCPKMTQ9H867 229 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PEG3Q9GZU2 1588 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 RGL4Q8IZJ4 473 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 PJA1Q8NG27 643 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 TPCN2Q8NHX9 752 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 HASPINQ8TF76 798 aa5.92□□□□□ -1.46
SRGAP1-201ENST00000355086 ADPRHL2Q9NX46 363 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms