RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 AP1B1Q10567 949 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 MUM1Q2TAK8 710 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 HSF5Q4G112 596 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-201ENST00000354547 TAPT1Q6NXT6 567 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 CCNYQ8ND76 341 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 TBCBQ99426 244 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 TRIM6Q9C030 488 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-201ENST00000354547 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
COL13A1-201ENST00000354547 LYPLA1O75608 230 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-201ENST00000354547 OLIG2Q13516 323 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 PKDCCQ504Y2 493 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 FBXO41Q8TF61 875 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 TEKT4Q8WW24 435 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 RTP4Q96DX8 246 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 CLPTM1LQ96KA5 538 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 FAM161BQ96MY7 647 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 OSMRQ99650 979 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 C16orf70Q9BSU1 422 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 DTLQ9NZJ0 730 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 GJD2Q9UKL4 321 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 CXCL11O14625 94 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 PGM1P36871 562 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 RABGGTBP53611 331 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 PITX1P78337 314 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-201ENST00000354547 SPDL1Q96EA4 605 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 EBF4Q9BQW3 602 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 MROH8Q9H579 483 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 DCLRE1BQ9H816 532 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 TRDMT1O14717 391 aaKnown RBP20.2■□□□□ 0.82
COL13A1-201ENST00000354547 MDM4O15151 490 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 CREB3O43889 395 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 TGDSO95455 350 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 ATG16L1Q676U5 607 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 TEX9Q8N6V9 391 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 SLC2A14Q8TDB8 520 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 ATXN7L3BQ96GX2 97 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 FAXDC2Q96IV6 333 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 TLE6Q9H808 572 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 MTMR10Q9NXD2 777 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 SPDYE5A6NIY4 337 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 DPYSL4O14531 572 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 RPL10AP62906 217 aaKnown RBP20.2■□□□□ 0.82
COL13A1-201ENST00000354547 MXRA7P84157 204 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 THOC5Q13769 683 aaKnown RBP20.2■□□□□ 0.82
COL13A1-201ENST00000354547 NME8Q8N427 588 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 LINC01465Q8N7H1 131 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 SMC1BQ8NDV3 1235 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 STKLD1Q8NE28 680 aa20.2■□□□□ 0.82
COL13A1-201ENST00000354547 BRCA1P38398 1863 aaKnown RBP20.2■□□□□ 0.82
COL13A1-201ENST00000354547 CAPN9O14815 690 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 NEBLO76041 1014 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 VAV1P15498 845 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 STILQ15468 1287 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 MARCH8Q5T0T0 291 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 CRLF3Q8IUI8 442 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 MGAT1P26572 445 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 GRM5P41594 1212 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 GTF2A2P52657 109 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 UBAP2LQ14157 1087 aaKnown RBP20.19■□□□□ 0.82
COL13A1-201ENST00000354547 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 TP53INP2Q8IXH6 220 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 ADGRF2Q8IZF7 708 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 ADARB2Q9NS39 739 aaKnown RBP20.19■□□□□ 0.82
COL13A1-201ENST00000354547 ZNF180Q9UJW8 692 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 HOXA11P31270 313 aaPredicted RBP20.19■□□□□ 0.82
COL13A1-201ENST00000354547 GNL1P36915 607 aaPredicted RBP20.19■□□□□ 0.82
COL13A1-201ENST00000354547 STX3Q13277 289 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 DCAF6Q58WW2 860 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 NCBP2-AS2Q69YL0 99 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 MAMDC4Q6UXC1 1216 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL13A1-201ENST00000354547 COLGALT1Q8NBJ5 622 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 HTR3CQ8WXA8 447 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 STMN2Q93045 179 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 OSBPL1AQ9BXW6 950 aa20.19■□□□□ 0.82
COL13A1-201ENST00000354547 FRMD8Q9BZ67 464 aaPredicted RBP20.19■□□□□ 0.82
COL13A1-201ENST00000354547 A0A0G2JMZ2 1700 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 LRRC37A2A6NM11 1700 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 GCATO75600 419 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 POU5F1BQ06416 359 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 NME3Q13232 169 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 DPYSL2Q16555 572 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 TFB1MQ8WVM0 346 aaKnown RBP20.18■□□□□ 0.82
COL13A1-201ENST00000354547 AGAP3Q96P47 875 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 PCDHA11Q9Y5I1 949 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 PSAT1Q9Y617 370 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 HNRNPCL1O60812 293 aaKnown RBP20.18■□□□□ 0.82
COL13A1-201ENST00000354547 DNAJC6O75061 913 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 RECQL4O94761 1208 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 ENDOVQ8N8Q3 282 aaKnown RBP20.18■□□□□ 0.82
COL13A1-201ENST00000354547 BEST2Q8NFU1 509 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 PPTC7Q8NI37 304 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 DNAJC9Q8WXX5 260 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 CDCA5Q96FF9 252 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 TUBB6Q9BUF5 446 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 SHCBP1LQ9BZQ2 653 aa20.18■□□□□ 0.82
COL13A1-201ENST00000354547 FAM159BA6NKW6 160 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 MEI4A8MW99 385 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 CLDN5O00501 218 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SPTLC1O15269 473 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms