RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MT-ND3P03897 115 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 GAD2Q05329 585 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 PPP2R5DQ14738 602 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 C15orf59Q2T9L4 293 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 FOXR2Q6PJQ5 311 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ELMOD2Q8IZ81 293 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CCDC89Q8N998 374 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ZSWIM2Q8NEG5 633 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF384Q8TF68 577 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 TFB1MQ8WVM0 346 aaKnown RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CELF1Q92879 486 aaKnown RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 NLRP4Q96MN2 994 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SENP7Q9BQF6 1050 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 RIOK1Q9BRS2 568 aaKnown RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 APOL6Q9BWW8 343 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ZMAT5Q9UDW3 170 aaKnown RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 MYO3BQ8WXR4 1341 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 DUOX1Q9NRD9 1551 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 COL1A1P02452 1464 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CLIC2O15247 247 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CYP1A2P05177 515 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 MCF2P10911 925 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 OPRL1P41146 370 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 HSPA13P48723 471 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CACNB3P54284 484 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 IFITM3Q01628 133 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CHRNEQ04844 493 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 SUZ12Q15022 739 aaKnown RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CHI3L2Q15782 390 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 TBCCQ15814 346 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 EFHC2Q5JST6 749 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 FRMD5Q7Z6J6 570 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CARM1Q86X55 608 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 FAM47BQ8NA70 645 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CATSPER1Q8NEC5 780 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF564Q8TBZ8 553 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 MMP19Q99542 508 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 TDRD1Q9BXT4 1180 aaKnown RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 IMPG2Q9BZV3 1241 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 IKZF4Q9H2S9 585 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CNTN3Q9P232 1028 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 B3GNT3Q9Y2A9 372 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 DENND3A2RUS2 1198 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 FOXN3O00409 490 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 NOP56O00567 594 aaKnown RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CSDE1O75534 798 aaKnown RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 TSPAN9O75954 239 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 C8BP07358 591 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 MSL3P1P0C860 447 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CD1EP15812 388 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 THOP1P52888 689 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 GALNT2Q10471 571 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 NFATC3Q12968 1075 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 Q3C1V9 767 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF786Q8N393 782 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 ETNPPLQ8TBG4 499 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 GIPC2Q8TF65 315 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 AGPAT1Q99943 283 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CPVLQ9H3G5 476 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 STN1Q9H668 368 aaKnown RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 COQ10BQ9H8M1 238 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 SCUBE2Q9NQ36 999 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 PNPLA3Q9NST1 481 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 GDAP2Q9NXN4 497 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 TNS1Q9HBL0 1735 aaKnown RBP10.97□□□□□ -0.65
CAPN3-203ENST00000349748 CLUHO75153 1309 aa10.97□□□□□ -0.65
CAPN3-203ENST00000349748 MAGEB6P1A0A0J9YX57 407 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF701M0R085 212 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 B4GALT4O60513 344 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 BBOX1O75936 387 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 SEC24DO94855 1032 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 GYG1P46976 350 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 HADHBP55084 474 aaKnown RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 COPZ1P61923 177 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 TXNL4AP83876 142 aaKnown RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 RAB39AQ14964 217 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 SLC35G1Q2M3R5 365 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 PTAR1Q7Z6K3 402 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 KBTBD7Q8WVZ9 684 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 PMEPA1Q969W9 287 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 CDK5RAP1Q96SZ6 601 aaKnown RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 NPLQ9BXD5 320 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-203ENST00000349748 SLC30A1Q9Y6M5 507 aa10.96□□□□□ -0.65
CAPN3-203ENST00000349748 CENPBD1B2RD01 187 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 E9PMD0 336 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 ADSSP30520 456 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 GNL1P36915 607 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-203ENST00000349748 RACK1P63244 317 aaKnown RBP10.96□□□□□ -0.66
CAPN3-203ENST00000349748 CLCQ05315 142 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 FLOT2Q14254 428 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 ABCB5Q2M3G0 1257 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 TP53INP1Q96A56 240 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 OSBPL11Q9BXB4 747 aa10.96□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-203ENST00000349748 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-203ENST00000349748 AP4S1Q9Y587 144 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms