RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CGGBP1Q9UFW8 167 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 SLC13A4Q9UKG4 626 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 PCOLCE2Q9UKZ9 415 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 H0Y8X5 98 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 MUSKO15146 869 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 HS6ST1O60243 411 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CYP7B1O75881 506 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ATP1A1P05023 1023 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 PDGFRAP16234 1089 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SERPINA4P29622 427 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SCNN1DP51172 638 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SUMO2P61956 95 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 MBNL2Q5VZF2 373 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 ZNF365Q70YC5 407 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SYCP3Q8IZU3 236 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 RYBPQ8N488 228 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 GALNT6Q8NCL4 622 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SLC16A10Q8TF71 515 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 KCNE4Q8WWG9 221 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 MYO19Q96H55 970 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 B3GALT6Q96L58 329 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CCDC77Q9BR77 488 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 METTL22Q9BUU2 404 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 IRX2Q9BZI1 471 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 NHEJ1Q9H9Q4 299 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 TLR8Q9NR97 1041 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 ARHGAP20Q9P2F6 1191 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 TBX20Q9UMR3 447 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 HPSEQ9Y251 543 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 FAM95CA0A1B0GW59 222 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 POTEFA5A3E0 1075 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SAC3D1A6NKF1 404 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 HNRNPCL3B7ZW38 293 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 POLRMTO00411 1230 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 EXOC3O60645 756 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ANP32DO95626 131 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ANXA1P04083 346 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 POTEIP0CG38 1075 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 HNRNPCL4P0DMR1 293 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 PKMP14618 531 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 PCGF2P35227 344 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 NFIAQ12857 509 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ARHGAP15Q53QZ3 475 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 TAF1BQ53T94 588 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 AGBL2Q5U5Z8 902 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 NXNQ6DKJ4 435 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 POTEEQ6S8J3 1075 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CHSY1Q86X52 802 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CEP97Q8IW35 865 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 REXO1Q8N1G1 1221 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 TFAP2CQ92754 450 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 HPS3Q969F9 1004 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CYFIP2Q96F07 1278 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SEPHS2Q99611 448 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 GP6Q9HCN6 339 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 PLA2G4CQ9UP65 541 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SNX8Q9Y5X2 465 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ITSN1Q15811 1721 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 NCAPD2Q15021 1401 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 PALLDQ8WX93 1383 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 POTEB3A0JP26 581 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CYP17A1P05093 508 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 NCAM1P13591 858 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ITGA3P26006 1051 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 LSSP48449 732 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 NME5P56597 212 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ERVK-9P63128 1117 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ALKBH1Q13686 389 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 KHDC1Q4VXA5 237 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 NAIF1Q69YI7 327 aaPredicted RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 POTEBQ6S5H4 581 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 FAM111BQ6SJ93 734 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 STRA8Q7Z7C7 330 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 DCP2Q8IU60 420 aaKnown RBP6.17□□□□□ -1.42
RFC1-201ENST00000349703 AGGF1Q8N302 714 aaeCLIP6.17□□□□□ -1.421e-7■□□□□ 9.2
RFC1-201ENST00000349703 GAB3Q8WWW8 586 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 KRT35Q92764 455 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 TEX12Q9BXU0 123 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 CDH19Q9H159 772 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ZC4H2Q9NQZ6 224 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 ADA2Q9NZK5 511 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 SNX12Q9UMY4 172 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 TNFSF13BQ9Y275 285 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 MROH1Q8NDA8 1641 aa6.17□□□□□ -1.42
RFC1-201ENST00000349703 LGALS16A8MUM7 142 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 RGS16O15492 202 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 BUB1O43683 1085 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CDC40O60508 579 aaKnown RBP eCLIP6.16□□□□□ -1.424e-7■■■■□ 26.3
RFC1-201ENST00000349703 TSPAN1O60635 241 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PRLRP16471 622 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MSR1P21757 451 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 SOX8P57073 446 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CD81P60033 236 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 TXNL4AP83876 142 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 SURF1Q15526 300 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 EZH2Q15910 746 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 CCDC190Q86UF4 302 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PLD3Q8IV08 490 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms