RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 PCDHGC3Q9UN70 934 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 E7ENQ6 273 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 MDM4O15151 490 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 BANF1O75531 89 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 DNAJC8O75937 253 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ELF3P78545 371 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 P3H1Q32P28 736 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 CLLU1OSQ5K130 101 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 TAOK1Q7L7X3 1001 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 FAM35AQ86V20 835 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 DYDC1Q8WWB3 177 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 VCPIP1Q96JH7 1222 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 STMN4Q9H169 189 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 FSCN2O14926 492 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 PCSK1P29120 753 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ITIH4Q14624 930 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ARFGAP1Q8N6T3 406 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 SEPT8Q92599 483 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ARHGEF2Q92974 986 aaKnown RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 RBM41Q96IZ5 413 aaKnown RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ABCF3Q9NUQ8 709 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ANAPC5Q9UJX4 755 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 CNTN6Q9UQ52 1028 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 MSI1O43347 362 aaKnown RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 MGRN1O60291 552 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ALDH2P05091 517 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 RBP3P10745 1247 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 RAG1P15918 1043 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 SYN1P17600 705 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 AMPD1P23109 780 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 TPP2P29144 1249 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 CTCFP49711 727 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 SCNN1BP51168 640 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 DEUP1Q05D60 604 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 MFSD5Q6N075 450 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 TRMT10CQ7L0Y3 403 aaKnown RBP13.54□□□□□ -0.24
COL18A1-201ENST00000342220 KDELC2Q7Z4H8 507 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ARHGAP22Q7Z5H3 698 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 LRRTM3Q86VH5 581 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ANKMY2Q8IV38 441 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 ANKRD42Q8N9B4 389 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 OR10T2Q8NGX3 314 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 CCDC134Q9H6E4 229 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 SFMBT1Q9UHJ3 866 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 MFHAS1Q9Y4C4 1052 aa13.54□□□□□ -0.24
COL18A1-201ENST00000342220 C5orf42Q9H799 3197 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 CCDC78A2IDD5 438 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 KRT7P08729 469 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 ITGA8P53708 1063 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 KYNUQ16719 465 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 UPP1Q16831 310 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 CCDC14Q49A88 953 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 MAP3K21Q5TCX8 1036 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 TMEM173Q86WV6 379 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 CCDC97Q96F63 343 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 CHST12Q9NRB3 414 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 WHRNQ9P202 907 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 TFDP3Q5H9I0 405 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 RHBDF2Q6PJF5 856 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 TRPM8Q7Z2W7 1104 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 CCDC185Q8N715 623 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 SLC35F5Q8WV83 523 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 KHSRPQ92945 711 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 SNRNP25Q9BV90 132 aaKnown RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 ROPN1BQ9BZX4 212 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 EBF2Q9HAK2 575 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 ROPN1Q9HAT0 212 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-201ENST00000342220 PRDM16Q9HAZ2 1276 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 KCNK9Q9NPC2 374 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.53□□□□□ -0.244e-6■■■■□ 26.5
COL18A1-201ENST00000342220 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
COL18A1-201ENST00000342220 TCP11X1B4DZS4 312 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 GABBR2O75899 941 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 IVDP26440 423 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.24
COL18A1-201ENST00000342220 MGAT3Q09327 533 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 ARMCX6Q7L4S7 300 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 RCOR2Q8IZ40 523 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 GPR62Q9BZJ7 368 aa13.52□□□□□ -0.24
COL18A1-201ENST00000342220 TRIM4Q9C037 500 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms