RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 KLK14Q9P0G3 267 aa10.8□□□□□ -0.68
CAPRIN1-201ENST00000341394 GTF3C4Q9UKN8 822 aa10.8□□□□□ -0.68
CAPRIN1-201ENST00000341394 SPTLC1O15269 473 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 LCA5LO95447 670 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 INHAP05111 366 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 RFX1P22670 979 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PKNOX1P55347 436 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 FAAP100Q0VG06 881 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 KLHL38Q2WGJ6 581 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 CDCA2Q69YH5 1023 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 TAF2Q6P1X5 1199 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 NPNTQ6UXI9 565 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 ZNF75CPQ92670 426 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PCDHB18PQ96TA0 734 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 TMEM165Q9HC07 324 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SARS2Q9NP81 518 aaKnown RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 THEGQ9P2T0 379 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SSX2IPQ9Y2D8 614 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 CITO14578 2027 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 DPPA5A6NC42 116 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SH3BP5O60239 455 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PIGRP01833 764 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SETSIPP0DME0 302 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 MCF2P10911 925 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 ATICP31939 592 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 TDRD10Q5VZ19 366 aaKnown RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 CCNJLQ8IV13 435 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 CYP4F12Q9HCS2 524 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SNTG2Q9NY99 539 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SLC17A7Q9P2U7 560 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 UVRAGQ9P2Y5 699 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PLA2G4CQ9UP65 541 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 NR2E3Q9Y5X4 410 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 STYXL1Q9Y6J8 313 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 CNTNAP2Q9UHC6 1331 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 LACTBL1A8MY62 500 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 GNGT2O14610 69 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 IGHA2P01877 340 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 TFE3P19532 575 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PPM1FP49593 454 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 AP3M2P53677 418 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 GJA9P57773 515 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 MYL6P60660 151 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 NSUN2Q08J23 767 aaKnown RBP eCLIP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 HEATR6Q6AI08 1181 aaKnown RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 TTC7BQ86TV6 843 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SH3TC2Q8TF17 1288 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 MAGEB18Q96M61 343 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SEMA6AQ9H2E6 1030 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 MCM8Q9UJA3 840 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 ZMYND8Q9ULU4 1186 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 PCDHB2Q9Y5E7 798 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 SNX9Q9Y5X1 595 aa10.79□□□□□ -0.68
CAPRIN1-201ENST00000341394 VNN1O95497 513 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 SDC4P31431 198 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 GEMIN4P57678 1058 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 TSPY1Q01534 308 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 MCL1Q07820 350 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 USP4Q13107 963 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ITIH4Q14624 930 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 TMEM132DQ14C87 1099 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 C16orf87Q6PH81 154 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ECHDC2Q86YB7 292 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 OR6P1Q8NGX9 317 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 FEZF2Q8TBJ5 459 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 UCMAQ8WVF2 138 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ALKBH8Q96BT7 664 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 SYT11Q9BT88 431 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 DNAJC16Q9Y2G8 782 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 SCN1AP35498 2009 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 IL18RAPO95256 599 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 AKAP5P24588 427 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ZACNQ401N2 412 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 TMTC4Q5T4D3 741 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 WDR49Q8IV35 697 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ATP6V1E2Q96A05 226 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 GRAMD1AQ96CP6 724 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 TTC25Q96NG3 672 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 NACA2Q9H009 215 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 WWP1Q9H0M0 922 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 KBTBD13C9JR72 458 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 TSPAN1O60635 241 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 SHOX2O60902 331 aaPredicted RBP10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ITGB3P05106 788 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 DARSP14868 501 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 ESRRGP62508 458 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 MRPS35P82673 323 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 SNX17Q15036 470 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 NRF1Q16656 503 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 RFWD3Q6PCD5 774 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 DENND5BQ6ZUT9 1274 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 DEFB107AQ8IZN7 70 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 B4GALNT2Q8NHY0 566 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 HELQQ8TDG4 1101 aa10.78□□□□□ -0.68
CAPRIN1-201ENST00000341394 PDCD6IPQ8WUM4 868 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms