RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 RBBP8Q99708 897 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 INTS13Q9NVM9 706 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TRMT6Q9UJA5 497 aaKnown RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 GOLGA8TH3BQL2 631 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 CRYBB1P53674 252 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 POU4F1Q01851 419 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 ARMC6Q6NXE6 501 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 SCLYQ96I15 445 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 STN1Q9H668 368 aaKnown RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 NFASCO94856 1347 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 TRIM66O15016 1216 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 CXCL8P10145 99 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 VHLP40337 213 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 CYTH1Q15438 398 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 TRIP10Q15642 601 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 FBXO47Q5MNV8 452 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 RPRD1AQ96P16 312 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-201ENST00000340748 YIPF2Q9BWQ6 316 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
DNMT1-201ENST00000340748 LGR5O75473 907 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 EIF4BP23588 611 aaKnown RBP13.21□□□□□ -0.29
DNMT1-201ENST00000340748 ERMARDQ5T6L9 678 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 BRSK2Q8IWQ3 736 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 FAM162AQ96A26 154 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 GPATCH2LQ9NWQ4 482 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 HEY2Q9UBP5 337 aa13.21□□□□□ -0.29
DNMT1-201ENST00000340748 CYP3A7-CYP3A51PA0A087WV96 503 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 MAGEB16A2A368 324 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 HEATR9A2RTY3 570 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 SLCO1B7G3V0H7 640 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 THRAP10827 490 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 NQO1P15559 274 aaKnown RBP13.21□□□□□ -0.3
DNMT1-201ENST00000340748 CYP3A7P24462 503 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 EFEMP1Q12805 493 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 GET4Q7L5D6 327 aaPredicted RBP13.21□□□□□ -0.3
DNMT1-201ENST00000340748 ZNF606Q8WXB4 792 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.3
DNMT1-201ENST00000340748 KCNMB3Q9NPA1 279 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 GDF3Q9NR23 364 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 CRLS1Q9UJA2 301 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 FAM32AQ9Y421 112 aaKnown RBP13.21□□□□□ -0.3
DNMT1-201ENST00000340748 RIPK2O43353 540 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 LRRC8BQ6P9F7 803 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 LPPQ93052 612 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 BRD8Q9H0E9 1235 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 NEUROG2Q9H2A3 272 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 NCKAP1Q9Y2A7 1128 aa13.21□□□□□ -0.3
DNMT1-201ENST00000340748 ARVCFO00192 962 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 KCNA3P22001 575 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 CYP2F1P24903 491 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 GRK2P25098 689 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 MTA1Q13330 715 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 GPM6BQ13491 265 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 RFWD2Q8NHY2 731 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SMPD4Q9NXE4 827 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 RBPJLQ9UBG7 517 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 RUVBL2Q9Y230 463 aaKnown RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SLC12A8A0AV02 714 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 NT5C1B-RDH14C9J2C7 533 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.38e-9■■□□□ 12.4
DNMT1-201ENST00000340748 TARSP26639 723 aaKnown RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 ACAP1Q15027 740 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SHROOM1Q2M3G4 852 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 CLEC4FQ8N1N0 589 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 TLR8Q9NR97 1041 aaKnown RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 ADGRA2Q96PE1 1338 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 MYOM1P52179 1685 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 ACKR2O00590 384 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 DNALI1O14645 258 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SLC39A12Q504Y0 691 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 DENND1BQ6P3S1 775 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 VPS37AQ8NEZ2 397 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 UROC1Q96N76 676 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 DACH2Q96NX9 599 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 TLR10Q9BXR5 811 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 NOD2Q9HC29 1040 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SIK3Q9Y2K2 1263 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 ZNF536O15090 1300 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 ACADSP16219 412 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 SMPD1P17405 629 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 MAP3K7CLP57077 242 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 TRIM48Q8IWZ4 208 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 EIF1ADQ8N9N8 165 aaKnown RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 PRPF18Q99633 342 aaKnown RBP13.2□□□□□ -0.3
DNMT1-201ENST00000340748 TBC1D13Q9NVG8 400 aa13.2□□□□□ -0.3
DNMT1-201ENST00000340748 KIF1CO43896 1103 aaKnown RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 SEC24DO94855 1032 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TRIM16O95361 564 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 TRIM60Q495X7 471 aa13.19□□□□□ -0.3
DNMT1-201ENST00000340748 SPATA16Q9BXB7 569 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms