RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 DHRS4L1P0CG22 281 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 CUL3Q13618 768 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 HIC1Q14526 733 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 TARBP2Q15633 366 aaKnown RBP14.88□□□□□ -0.03
CPSF7-201ENST00000340437 LHX5Q9H2C1 402 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 PDGFCQ9NRA1 345 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 PIM2Q9P1W9 311 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 LOXHD1Q8IVV2 1947 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 C2CD4BA6NLJ0 364 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 E9PBE3 544 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 GOLGA8TH3BQL2 631 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 TPP1O14773 563 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CHADO15335 359 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 KLHL41O60662 606 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 DGKIO75912 1065 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 ERVK-10P10266 1014 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 ASPHQ12797 758 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 GRAMD1BQ3KR37 738 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CMC1Q7Z7K0 106 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
CPSF7-201ENST00000340437 HES2Q9Y543 173 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CFLARO15519 480 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 MGAT1P26572 445 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CALRP27797 417 aaKnown RBP14.87□□□□□ -0.03
CPSF7-201ENST00000340437 TYK2P29597 1187 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CDH5P33151 784 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-201ENST00000340437 BAG6P46379 1132 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 SATB1Q01826 763 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 USP4Q13107 963 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 TMEM132DQ14C87 1099 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 TRIM42Q8IWZ5 723 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 RNF148Q8N7C7 305 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 MTMR14Q8NCE2 650 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 APOL2Q9BQE5 337 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CXCL16Q9H2A7 254 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CPSF2Q9P2I0 782 aaKnown RBP14.87□□□□□ -0.03
CPSF7-201ENST00000340437 HESX1Q9UBX0 185 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 EFR3BQ9Y2G0 817 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 NPTXRO95502 500 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 BPGMP07738 259 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 P4HA1P13674 534 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 SLC10A2Q12908 348 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-201ENST00000340437 ITGA9Q13797 1035 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 RAPH1Q70E73 1250 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 MOB2Q70IA6 237 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 AZIN2Q96A70 460 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 MCRS1Q96EZ8 462 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 GGA3Q9NZ52 723 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 PSAT1Q9Y617 370 aa14.87□□□□□ -0.03
CPSF7-201ENST00000340437 CCDC160A6NGH7 325 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 LIN7AO14910 233 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-201ENST00000340437 VDRP11473 427 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 IL4RP24394 825 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 SLC1A6P48664 564 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 MCCD1P59942 119 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-201ENST00000340437 ADGRF2Q8IZF7 708 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 GSDMBQ8TAX9 411 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 NT5C1AQ9BXI3 368 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 CNTN3Q9P232 1028 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 CENPFP49454 3210 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 PPEF2O14830 753 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 TGDSO95455 350 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 TXNP10599 105 aaKnown RBP14.86□□□□□ -0.03
CPSF7-201ENST00000340437 DESP17661 470 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 KRT72Q14CN4 511 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 RABGAP1LQ5R372 815 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 DPY19L2Q6NUT2 758 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 METTL7BQ6UX53 244 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 C10orf107Q8IVU9 208 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 FNIP1Q8TF40 1166 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 TUBGCP5Q96RT8 1024 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 DCXO43602 365 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 NUMBP49757 651 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 RABGGTBP53611 331 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 DSG1Q02413 1049 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 SH2D5Q6ZV89 423 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 DEFB107AQ8IZN7 70 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 ZBED3Q96IU2 234 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-201ENST00000340437 EBNA1BP2Q99848 306 aaKnown RBP14.86□□□□□ -0.03
CPSF7-201ENST00000340437 MRPL45Q9BRJ2 306 aaKnown RBP14.86□□□□□ -0.03
CPSF7-201ENST00000340437 DPP3Q9NY33 737 aa14.86□□□□□ -0.03
CPSF7-201ENST00000340437 MAGEA13PA6NCF6 341 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 DNAJC6O75061 913 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 TRIP10Q15642 601 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 SH3GL3Q99963 347 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 FRMD8P1Q9BZ68 369 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-201ENST00000340437 C2orf40Q9H1Z8 148 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 EBF3Q9H4W6 596 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 NRDE2Q9H7Z3 1164 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 FETUBQ9UGM5 382 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 KCNK1O00180 336 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 B4GALT4O60513 344 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 SPAG6O75602 509 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 GOT1P17174 413 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 HMGB2P26583 209 aaKnown RBP14.85□□□□□ -0.03
CPSF7-201ENST00000340437 OCRLQ01968 901 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 BOLA3Q53S33 107 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 ATP2A3Q93084 1043 aa14.85□□□□□ -0.03
CPSF7-201ENST00000340437 ANKRD27Q96NW4 1050 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms