RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MIIPQ5JXC2 388 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 NUGGCQ68CJ6 796 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 SASS6Q6UVJ0 657 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 TMEM110Q86TL2 294 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 RASSF3Q86WH2 238 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 UNC45BQ8IWX7 931 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 ALLCQ8N6M5 410 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 ZNF513Q8N8E2 541 aaPredicted RBP13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 TXNDC5Q8NBS9 432 aaKnown RBP13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 EDEM1Q92611 657 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 NOX5Q96PH1 765 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC4A5Q9BY07 1137 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 ST7Q9NRC1 585 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 ANO10Q9NW15 660 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 NFE2L3Q9Y4A8 694 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 DMXL1Q9Y485 3027 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 GPR179Q6PRD1 2367 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 BECN2A8MW95 431 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 LMNB2Q03252 620 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 MESP2Q0VG99 397 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 DSG2Q14126 1118 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 USP39Q53GS9 565 aaKnown RBP13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 ADGRF1Q5T601 910 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 FYB2Q5VWT5 728 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 SDE2Q6IQ49 451 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 CCDC33Q8N5R6 958 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 ZNF557Q8N988 423 aaPredicted RBP13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 NDRG1Q92597 394 aaKnown RBP13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 AZIN2Q96A70 460 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 ZC3H10Q96K80 434 aaKnown RBP13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 SERPINB11Q96P15 392 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 LHX5Q9H2C1 402 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 SIX2Q9NPC8 291 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 DNAJC12Q9UKB3 198 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 DAAM1Q9Y4D1 1078 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 CEP83Q9Y592 693 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
SIRPB3P-201ENST00000340424 PRR5-ARHGAP8B1AHC4 643 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 SGK1O00141 431 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 GFRA2O00451 464 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 PES1O00541 588 aaKnown RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 IRAK2O43187 625 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 RHOBTB1O94844 696 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 IGLV3-27P01718 113 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 CISD3P0C7P0 127 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 NCAM1P13591 858 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 NTSR1P30989 418 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 PXNP49023 591 aaPredicted RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC11A2P49281 568 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 ARHGAP8P85298 464 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 SRSF5Q13243 272 aaKnown RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 PDCLQ13371 301 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 BYSLQ13895 437 aaKnown RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 EIF4HQ15056 248 aaKnown RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 ELF2Q15723 593 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 STX1AQ16623 288 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 MPPE1Q53F39 396 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 SCUBE3Q8IX30 993 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 KIAA2013Q8IYS2 634 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 FAM71AQ8IYT1 594 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 DCLK2Q8N568 766 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 DDI1Q8WTU0 396 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 FAM149B1Q96BN6 582 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 DDX50Q9BQ39 737 aaKnown RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 MIS12Q9H081 205 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 POPDC2Q9HBU9 364 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 SFMBT1Q9UHJ3 866 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 TLR6Q9Y2C9 796 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 PCDHGA5Q9Y5G8 931 aa13.9□□□□□ -0.18
SIRPB3P-201ENST00000340424 E5RJQ4 531 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 PIK3R2O00459 728 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 CAPN9O14815 690 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 ZBTB24O43167 697 aaPredicted RBP13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 ADAM23O75077 832 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 CALCAP01258 141 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 GLI1P08151 1106 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 HNRNPLP14866 589 aaKnown RBP eCLIP13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 KRT9P35527 623 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 CAMK2BQ13554 666 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 MPP7Q5T2T1 576 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 CHPFQ8IZ52 775 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 CLEC4CQ8WTT0 213 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 PLCB1Q9NQ66 1216 aa13.89□□□□□ -0.19
SIRPB3P-201ENST00000340424 POLR3BQ9NW08 1133 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms