RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
TMC1-202ENST00000340019 RBM12Q9NTZ6 932 aaKnown RBP8.14□□□□□ -1.11
TMC1-202ENST00000340019 GPATCH2LQ9NWQ4 482 aa8.14□□□□□ -1.11
TMC1-202ENST00000340019 AP4E1Q9UPM8 1137 aa8.14□□□□□ -1.11
TMC1-202ENST00000340019 TLR6Q9Y2C9 796 aa8.14□□□□□ -1.11
TMC1-202ENST00000340019 HCFC2Q9Y5Z7 792 aa8.14□□□□□ -1.11
TMC1-202ENST00000340019 NOTCH4Q99466 2003 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 SPTBN5Q9NRC6 3674 aaKnown RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 EFCAB8A8MWE9 144 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 KCNU1A8MYU2 1149 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 PER2O15055 1255 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 MSI1O43347 362 aaKnown RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 PAPLNO95428 1278 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 IGLV3-27P01718 113 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 KRT10P13645 584 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 CDH6P55285 790 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 C2orf54Q08AI8 447 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 KCNC3Q14003 757 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 LLGL1Q15334 1064 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 TAF12Q16514 161 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 ZFYVE27Q5T4F4 411 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 SND1Q7KZF4 910 aaKnown RBP eCLIP8.13□□□□□ -1.11
TMC1-202ENST00000340019 NOA1Q8NC60 698 aaKnown RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 ZNF670Q9BS34 389 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 AP1M1Q9BXS5 423 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 TKTL2Q9H0I9 626 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 TRPM5Q9NZQ8 1165 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 KRIT1O00522 736 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 CTIFO43310 598 aaKnown RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 RFPL2O75678 378 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 OAS1P00973 400 aaKnown RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 GTF2F1P35269 517 aaKnown RBP eCLIP8.13□□□□□ -1.11
TMC1-202ENST00000340019 EFEMP1Q12805 493 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 SEMA3BQ13214 749 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 DUSP6Q16828 381 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 BRMS1LQ5PSV4 323 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 PPM1LQ5SGD2 360 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 PRELID2Q8N945 189 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 FCRL2Q96LA5 508 aaPredicted RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 KCTD15Q96SI1 283 aaPredicted RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 HEMGNQ9BXL5 484 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 DHX35Q9H5Z1 703 aaKnown RBP8.13□□□□□ -1.11
TMC1-202ENST00000340019 MARCH2Q9P0N8 246 aa8.13□□□□□ -1.11
TMC1-202ENST00000340019 COCHO43405 550 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 POU2F2P09086 479 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 CCR1P32246 355 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 CETN2P41208 172 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 EPHA5P54756 1037 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 TRIP4Q15650 581 aaPredicted RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 CYP1B1Q16678 543 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 ARL13BQ3SXY8 428 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 ODF2Q5BJF6 829 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 C10orf120Q5SQS8 335 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 HECTD3Q5T447 861 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 ARTNQ5T4W7 220 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 GAREM2Q75VX8 874 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 ADAT2Q7Z6V5 191 aaKnown RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 TADA2BQ86TJ2 420 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 RBM23Q86U06 439 aaKnown RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 MAP7D3Q8IWC1 876 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 PYROXD2Q8N2H3 581 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 MMGT1Q8N4V1 131 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 MRPL38Q96DV4 380 aaKnown RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 CALN1Q9BXU9 219 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.12□□□□□ -1.11
TMC1-202ENST00000340019 RCOR3Q9P2K3 495 aaPredicted RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 MYO9BQ13459 2157 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 CCDC188H7C350 402 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 RFXAPO00287 272 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 CCL16O15467 120 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 TJP3O95049 919 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 OLFM2O95897 454 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 HNRNPA1P09651 372 aaKnown RBP eCLIP8.12□□□□□ -1.11
TMC1-202ENST00000340019 ATP5C1P36542 298 aaKnown RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 RING1Q06587 406 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 KRT81Q14533 505 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 PABPC1LQ4VXU2 614 aaKnown RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 ANKRD20A8PQ5CZ79 823 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 ELMOD1Q8N336 334 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 RNF157Q96PX1 679 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 HAPLN3Q96S86 360 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 RNF38Q9H0F5 515 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 TLE6Q9H808 572 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 ZDHHC7Q9NXF8 308 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 CWC15Q9P013 229 aaKnown RBP8.12□□□□□ -1.11
TMC1-202ENST00000340019 DPP7Q9UHL4 492 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 DNMT3LQ9UJW3 386 aa8.12□□□□□ -1.11
TMC1-202ENST00000340019 C2orf78A6NCI8 922 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 FAM72CH0Y354 149 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 GABRR2P28476 465 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 TERF1P54274 439 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 TBX4P57082 545 aa8.11□□□□□ -1.11
TMC1-202ENST00000340019 PPP6R3Q5H9R7 873 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms