RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 ANGEL2Q5VTE6 544 aaKnown RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 XRRA1Q6P2D8 792 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 KCNT2Q6UVM3 1135 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 SATL1Q86VE3 508 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 SEPT1Q8WYJ6 367 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TRIM15Q9C019 465 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 APOBEC3GQ9HC16 384 aaKnown RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 CLUHO75153 1309 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ATP5BP06576 529 aaKnown RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 CXCL8P10145 99 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ME2P23368 584 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TNFSF9P41273 254 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 PTGER2P43116 358 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 RBP5P82980 135 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TMEM132DQ14C87 1099 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ADRM1Q16186 407 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 DRICH1Q6PGQ1 229 aaPredicted RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ARCQ7LC44 396 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 RAB44Q7Z6P3 723 aaPredicted RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 FAM131BQ86XD5 332 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 COLGALT1Q8NBJ5 622 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 LENG1Q96BZ8 264 aaPredicted RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 GPAMQ9HCL2 828 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TRIM13O60858 407 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 MT-CO1P00395 513 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 CST3P01034 146 aaPredicted RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 C4BPAP04003 597 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 TCEAL1Q15170 157 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 VWA5B1Q5TIE3 1220 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 IL31Q6EBC2 164 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 ZBTB49Q6ZSB9 765 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 GPR141Q7Z602 305 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 DDX1Q92499 740 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 DNAJC1Q96KC8 554 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 FIZ1Q96SL8 496 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 MMP19Q99542 508 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 STAP1Q9ULZ2 295 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 AP4B1Q9Y6B7 739 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 VDRP11473 427 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 FDFT1P37268 417 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 GP5P40197 560 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 USP46P62068 366 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 KCTD2Q14681 263 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 ACOT1Q86TX2 421 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 DIS3LQ8TF46 1054 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 LRRC39Q96DD0 335 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 NAT9Q9BTE0 207 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 FAM49AQ9H0Q0 323 aaPredicted RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 A0A096LPK6 155 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 MICAL2O94851 1124 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 LYPLA2O95372 231 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 NELFEP18615 380 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 SULT1E1P49888 294 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 KLF1Q13351 362 aaPredicted RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 IER5Q5VY09 327 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 PQLC1Q8N2U9 271 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 BHLHE22Q8NFJ8 381 aaPredicted RBP12.82□□□□□ -0.36
RIOK3-201ENST00000339486 DCAKDQ8WVC6 231 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 CNDP1Q96KN2 507 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 RNF157Q96PX1 679 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 CCDC68Q9H2F9 335 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 XPNPEP3Q9NQH7 507 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 HOXC10Q9NYD6 342 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 COL20A1Q9P218 1284 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
RIOK3-201ENST00000339486 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
RIOK3-201ENST00000339486 E5RJQ4 531 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 USP12O75317 370 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
RIOK3-201ENST00000339486 FGFR3P22607 806 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 TPP2P29144 1249 aaPredicted RBP12.81□□□□□ -0.36
RIOK3-201ENST00000339486 PDK1Q15118 436 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 TAF5Q15542 800 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 KCTD21Q4G0X4 260 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 DCAF6Q58WW2 860 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 C1orf220Q5T0J3 134 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 CYP2R1Q6VVX0 501 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 UNC5AQ6ZN44 842 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 C10orf107Q8IVU9 208 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 SLC35B2Q8TB61 432 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 EBNA1BP2Q99848 306 aaKnown RBP12.81□□□□□ -0.36
RIOK3-201ENST00000339486 CCDC90BQ9GZT6 254 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 AP4E1Q9UPM8 1137 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 CSPG5O95196 566 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
RIOK3-201ENST00000339486 OCA2Q04671 838 aa12.81□□□□□ -0.36
RIOK3-201ENST00000339486 VPS72Q15906 364 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms