RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 GLIS1Q8NBF1 620 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ETNPPLQ8TBG4 499 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ADAMTS16Q8TE57 1224 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TP53INP1Q96A56 240 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 MAELQ96JY0 434 aaKnown RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TDRD1Q9BXT4 1180 aaKnown RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 HOMER2Q9NSB8 354 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 SENP1Q9P0U3 644 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CHORDC1Q9UHD1 332 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TAGLN3Q9UI15 199 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TSC22D4Q9Y3Q8 395 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 UBIAD1Q9Y5Z9 338 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 MBLAC1A4D2B0 266 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L15C9J2P7 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L13C9JLJ4 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L11C9JVI0 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L18D6R9N7 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L22D6RA61 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L17D6RBQ6 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L19D6RCP7 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L20D6RJB6 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 FKTNO75072 461 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ATE1O95260 518 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CXCL10P02778 98 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 KCNA2P16389 499 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 MZF1P28698 734 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 MAGEA4P43358 317 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 SLC5A3P53794 718 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 PEX3P56589 373 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CAV1Q03135 178 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 USP17L24Q0WX57 530 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CALCOCO2Q13137 446 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 SPCS2Q15005 226 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 INAQ16352 499 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CYP2A13Q16696 494 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RWDD4Q6NW29 188 aaKnown RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RSPH3Q86UC2 560 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RAVER1Q8IY67 606 aaKnown RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ADGRF4Q8IZF3 695 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CPXCR1Q8N123 301 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TTC13Q8NBP0 860 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 IL31RAQ8NI17 732 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ATP6V0A1Q93050 837 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 EME1Q96AY2 570 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ATG4CQ96DT6 458 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TSG101Q99816 390 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CLSTN3Q9BQT9 956 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TRIM55Q9BYV6 548 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 VTA1Q9NP79 307 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RABGEF1Q9UJ41 708 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 FEM1BQ9UK73 627 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 APPL1Q9UKG1 709 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TBX21Q9UL17 535 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 STRIP2Q9ULQ0 834 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CLUHO75153 1309 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 FAM170AA1A519 330 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 SDR42E2A6NKP2 422 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 PRR5-ARHGAP8B1AHC4 643 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CCNT1O60563 726 aaKnown RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ENO1P06733 434 aaKnown RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RAG1P15918 1043 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ALDH1A3P47895 512 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CASP4P49662 377 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ARHGAP8P85298 464 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 MAP2K5Q13163 448 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 GRM1Q13255 1194 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 KRT81Q14533 505 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 MBTPS1Q14703 1052 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 HERC4Q5GLZ8 1057 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 SLC30A10Q6XR72 485 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 SYDE1Q6ZW31 735 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 PEX5LQ8IYB4 626 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RNF169Q8NCN4 708 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 DDI1Q8WTU0 396 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 TSSK1BQ9BXA7 367 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 OLAHQ9NV23 265 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 POMPQ9Y244 141 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 AP4B1Q9Y6B7 739 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 IGKV6-21A0A0C4DH24 114 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 POTEMA6NI47 508 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 MEI4A8MW99 385 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 TMEM114B3SHH9 223 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF701M0R085 212 aaPredicted RBP5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ARHGAP33O14559 1287 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ALOX15BO15296 676 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 TM9SF1O15321 606 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 CLDN3O15551 220 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 POLR2MP0CAP2 368 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 OCM2P0CE71 109 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 OCMP0CE72 109 aaPredicted RBP5.77□□□□□ -1.48
CSDE1-202ENST00000339438 TCEA1P23193 301 aaKnown RBP5.77□□□□□ -1.48
CSDE1-202ENST00000339438 PPARGP37231 505 aaPredicted RBP5.77□□□□□ -1.48
CSDE1-202ENST00000339438 GSSP48637 474 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 CTAG1AP78358 180 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF200P98182 395 aaPredicted RBP5.77□□□□□ -1.48
CSDE1-202ENST00000339438 SP3Q02447 781 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 PDK1Q15118 436 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 DNAL1Q4LDG9 190 aa5.77□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms