RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CENPLQ8N0S6 344 aaPredicted RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 DNAJC5Q9H3Z4 198 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 TNPO3Q9Y5L0 923 aaKnown RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 CASP1P29466 404 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 XPNPEP3Q9NQH7 507 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 MYPNQ86TC9 1320 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 FAM220BPB1ANY3 271 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 SNAP23O00161 211 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 MED24O75448 989 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CENPAP49450 140 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 TROAPQ12815 778 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 IYDQ6PHW0 289 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 KCTD10Q9H3F6 313 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 INTS7Q9NVH2 962 aaKnown RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 OR1E1P30953 314 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 BLVRAP53004 296 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 GRTP1Q5TC63 336 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CAPRIN2Q6IMN6 1127 aaKnown RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 HEXDCQ8WVB3 486 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 GLMNQ92990 594 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 DTNBO60941 627 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CDK7P50613 346 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ITIH4Q14624 930 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 REPS2Q8NFH8 660 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ATL1Q8WXF7 558 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 SEZ6LQ9BYH1 1024 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 AP4E1Q9UPM8 1137 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CAB39Q9Y376 341 aaPredicted RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.39
FN1-202ENST00000336916 C15orf38-AP3S2A0A0A6YYH1 394 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 PDHXO00330 501 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ASGR1P07306 291 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ARPINQ7Z6K5 226 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 NFKBIL1Q9UBC1 381 aaPredicted RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 MYOM1P52179 1685 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 EPB42P16452 691 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 PTPN11Q06124 597 aaPredicted RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ZNF507Q8TCN5 953 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ZSWIM1Q9BR11 485 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 CIPCQ9C0C6 399 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 PABPC3Q9H361 631 aaKnown RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 ABCC13Q9NSE7 274 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 CYP39A1Q9NYL5 469 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 GYS1P13807 737 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 SERPINA4P29622 427 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ITGA8P53708 1063 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ERVK-24P63145 666 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 NOGQ13253 232 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 DIABLOQ9NR28 239 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 KLC4Q9NSK0 619 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 BTBD7Q9P203 1132 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 COL1A2P08123 1366 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 GCATO75600 419 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 CLK3P49761 638 aaKnown RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 ITPK1Q13572 414 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ZNF268Q14587 947 aaPredicted RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 KYNUQ16719 465 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 CCDC142Q17RM4 750 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 AADATQ8N5Z0 425 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 UBA3Q8TBC4 463 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 BDH2Q9BUT1 245 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ADI1Q9BV57 179 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 TEX33O43247 280 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 FXR1P51114 621 aaKnown RBP eCLIP12.58□□□□□ -0.4
FN1-202ENST00000336916 CDH17Q12864 832 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 STK4Q13043 487 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 AGR3Q8TD06 166 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 FANCEQ9HB96 536 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 PCDH9Q9HC56 1237 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 YY1P25490 414 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 THOP1P52888 689 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 SNRPD1P62314 119 aaKnown RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 ALDH6A1Q02252 535 aaKnown RBP12.58□□□□□ -0.4
FN1-202ENST00000336916 ACOT1Q86TX2 421 aa12.58□□□□□ -0.4
FN1-202ENST00000336916 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms