RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ARL2BPQ9Y2Y0 163 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 NRXN3Q9Y4C0 1643 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 PDE4DIPQ5VU43 2346 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 IGLV3-22A0A075B6J6 115 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 SIGLEC16A6NMB1 481 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 SUPT7LO94864 414 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 STMN1P16949 149 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 PBLDP30039 288 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 MEA1Q16626 185 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 SDHAF4Q5VUM1 108 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 TEKT4Q8WW24 435 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 FAM167BQ9BTA0 163 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 NIFKQ9BYG3 293 aaKnown RBP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 RUBCNLQ9H714 662 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 GOLGA2P5Q9HBQ8 144 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 KPNA3O00505 521 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 PYGBP11216 843 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 OR1D2P34982 312 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 KCNMA1Q12791 1236 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 PKN3Q6P5Z2 889 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 C12orf29Q8N999 325 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 BRD8Q9H0E9 1235 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 PCDHA2Q9Y5H9 948 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 RNF103-CHMP3A0A140T963 221 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 SMIM28A0A1B0GU29 152 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 NR2C2P49116 596 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 FBXW4P57775 412 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CDH17Q12864 832 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 DDX39BQ13838 428 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 TMCO4Q5TGY1 634 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 STRA8Q7Z7C7 330 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 OSGEPL1Q9H4B0 414 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 L2HGDHQ9H9P8 463 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 UBA2Q9UBT2 640 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CASZ1Q86V15 1759 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 TBC1D3BA6NDS4 549 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CLASP2O75122 1294 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CHI3L2Q15782 390 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 HIST2H2ACQ16777 129 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CCDC157Q569K6 752 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 HIST2H2AA3Q6FI13 130 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 LRRC8EQ6NSJ5 796 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 LRRC8DQ7L1W4 858 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 BSNDQ8WZ55 320 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 FAM111AQ96PZ2 611 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CHD2O14647 1828 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 LTBP3Q9NS15 1303 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 PHF20L1A8MW92 1017 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 RNF103O00237 685 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 EPHB6O15197 1021 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CXCL14O95715 111 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 RPSAP08865 295 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CREMQ03060 361 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 MPP3Q13368 585 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 RASIP1Q5U651 963 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 FAM183BPQ6ZVS7 135 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 RRM2BQ7LG56 351 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 ZBTB10Q96DT7 871 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 MFSD14AQ96MC6 490 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 ZFP42Q96MM3 310 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 PNKPQ96T60 521 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 TLR10Q9BXR5 811 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CDC42EP4Q9H3Q1 356 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 DHX33Q9H6R0 707 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 DNMT3LQ9UJW3 386 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 MAFBQ9Y5Q3 323 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 TRAV19A0A0A6YYK7 116 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CHUKO15111 745 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 ATP5BP06576 529 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 VCLP18206 1134 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 NUP93Q8N1F7 819 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 PIP4K2CQ8TBX8 421 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 STN1Q9H668 368 aaKnown RBP15.43■□□□□ 0.06
C9orf47-201ENST00000334490 FBXL21Q9UKT6 434 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 TRHDEQ9UKU6 1024 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 RNF112Q9ULX5 631 aa15.43■□□□□ 0.06
C9orf47-201ENST00000334490 CLDN5O00501 218 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 ZNF862O60290 1169 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 IGSF6O95976 241 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 ENO1P06733 434 aaKnown RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 RARAP10276 462 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PRMT2P55345 433 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 DDR2Q16832 855 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 ERAP2Q6P179 960 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 LENG9Q96B70 501 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 CDY1Q9Y6F8 540 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 SLC9A3R1O14745 358 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 GLRBP48167 497 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 ZNF135P52742 658 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-201ENST00000334490 MAMLD1Q13495 774 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 RAP1GAP2Q684P5 730 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 MYO1HQ8N1T3 1032 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 TTPALQ9BTX7 342 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 RIC8BQ9NVN3 520 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 TMEM51Q9NW97 253 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 PTCH2Q9Y6C5 1203 aa15.42■□□□□ 0.06
C9orf47-201ENST00000334490 EFCAB14O75071 495 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms