RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TMEM247A6NEH6 219 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 APOC4-APOC2K7ER74 178 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 TRUB2O95900 331 aaKnown RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 APOC2P02655 101 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 PPP3CCP48454 512 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 SCNN1BP51168 640 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 TBX4P57082 545 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 AGAP9Q5VTM2 703 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 GPR20Q99678 358 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 LIASO43766 372 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 CNGA3Q16281 694 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 DDI1Q8WTU0 396 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 MRPL45Q9BRJ2 306 aaKnown RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 NOD2Q9HC29 1040 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 TRMT6Q9UJA5 497 aaKnown RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 E9PBE3 544 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 KLHL41O60662 606 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 RHOCP08134 193 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 CNGA2Q16280 664 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 ZCCHC9Q8N567 271 aaKnown RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 DMAP1Q9NPF5 467 aaPredicted RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 TLR8Q9NR97 1041 aaKnown RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 PCDHB5Q9Y5E4 795 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 TIMM44O43615 452 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 ABCG1P45844 678 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 N4BP2L1Q5TBK1 243 aaPredicted RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 CCNJLQ8IV13 435 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 ALG3Q92685 438 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 VPS28Q9UK41 221 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 WEE1P30291 646 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 POU4F1Q01851 419 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 TBCBQ99426 244 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 RALBP11234 206 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 COPAP53621 1224 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 SLC35G1Q2M3R5 365 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 FUT11Q495W5 492 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 MYH2Q9UKX2 1941 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 ARF4P18085 180 aaPredicted RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 FLT3P36888 993 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 GTF2H3Q13889 308 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 MRNIPQ6NTE8 343 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 ZCCHC23Q6ZST2 131 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 ADCK2Q7Z695 626 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 PALB2Q86YC2 1186 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 RAB27AP51159 221 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 KCNK16Q96T55 309 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 NXF3Q9H4D5 531 aaKnown RBP13.37□□□□□ -0.27
VSTM4-202ENST00000332853 ETNK2Q9NVF9 386 aa13.37□□□□□ -0.27
VSTM4-202ENST00000332853 MT-CO1P00395 513 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 CCND1P24385 295 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 OR1E1P30953 314 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 RPA3P35244 121 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SERPINB4P48594 390 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 RGS4P49798 205 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 MGAT5Q09328 741 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 C18orf25Q96B23 403 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SNRNP25Q9BV90 132 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 TM9SF1O15321 606 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 C5P01031 1676 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 LTFP02788 710 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 CPA3P15088 417 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SH3BGRP55822 239 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SKIV2LQ15477 1246 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 GOLGA2P5Q9HBQ8 144 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SPATS2LQ9NUQ6 558 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 SYCE1LA8MT33 242 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 ZNF197O14709 1029 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 URODP06132 367 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 TRIP10Q15642 601 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 KCNMB4Q86W47 210 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 PHF13Q86YI8 300 aaPredicted RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 NRBF2Q96F24 287 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 APBA2Q99767 749 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 COG5Q9UP83 839 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 BAZ2AQ9UIF9 1905 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 LYPLA2O95372 231 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 ERBB2P04626 1255 aa13.36□□□□□ -0.27
VSTM4-202ENST00000332853 EEF1DP29692 281 aaKnown RBP13.36□□□□□ -0.27
VSTM4-202ENST00000332853 NR2C2P49116 596 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms