RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CENPIQ92674 756 aaPredicted RBP20.55■□□□□ 0.88
SOX2-201ENST00000325404 MOCS1Q9NZB8 636 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 DERAQ9Y315 318 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 CAPN15O75808 1086 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 PGM1P36871 562 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 SARNPP82979 210 aaKnown RBP20.55■□□□□ 0.88
SOX2-201ENST00000325404 LAMC2Q13753 1193 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 SNX30Q5VWJ9 437 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 CST9Q5W186 159 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 IRGCQ6NXR0 463 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 PMF1Q6P1K2 205 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 ACAP3Q96P50 834 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 QKIQ96PU8 341 aaKnown RBP eCLIP20.55■□□□□ 0.88
SOX2-201ENST00000325404 C11orf84Q9BUA3 381 aaPredicted RBP20.55■□□□□ 0.88
SOX2-201ENST00000325404 C1orf21Q9H246 121 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 STN1Q9H668 368 aaKnown RBP20.55■□□□□ 0.88
SOX2-201ENST00000325404 NMRK1Q9NWW6 199 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.55■□□□□ 0.88
SOX2-201ENST00000325404 LRCH1Q9Y2L9 728 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 ALDH1A2O94788 518 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 CSH1P0DML2 217 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 CSH2P0DML3 217 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 ARF4P18085 180 aaPredicted RBP20.54■□□□□ 0.88
SOX2-201ENST00000325404 CYP2F1P24903 491 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 HUNKP57058 714 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 KLC1Q07866 573 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 ARHGAP1Q07960 439 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 CHI3L2Q15782 390 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 TTC7BQ86TV6 843 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 STMN2Q93045 179 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 FAM136AQ96C01 138 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 TAGLN3Q9UI15 199 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 COL1A2P08123 1366 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 A0A087WZ62 844 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 ECM2O94769 699 aaPredicted RBP20.54■□□□□ 0.88
SOX2-201ENST00000325404 L1CAMP32004 1257 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 HDAC4P56524 1084 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 NAB1Q13506 487 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 GRB14Q14449 540 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 CA9Q16790 459 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 DNAL1Q4LDG9 190 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 TRIM68Q6AZZ1 485 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 NET1Q7Z628 596 aaPredicted RBP20.54■□□□□ 0.88
SOX2-201ENST00000325404 FDXACB1Q9BRP7 624 aaPredicted RBP20.54■□□□□ 0.88
SOX2-201ENST00000325404 RNPEPQ9H4A4 650 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 THAP1Q9NVV9 213 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 GPATCH2LQ9NWQ4 482 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 DNAJB4Q9UDY4 337 aa20.54■□□□□ 0.88
SOX2-201ENST00000325404 HMX2A2RU54 273 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 HACD1B0YJ81 288 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 GRAP2O75791 330 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 SKIP12755 728 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 AP1B1Q10567 949 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 SYCP2LQ5T4T6 812 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 DPH6Q7L8W6 267 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 PLEKHH3Q7Z736 793 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 ALYREFQ86V81 257 aaKnown RBP20.53■□□□□ 0.88
SOX2-201ENST00000325404 CCNJLQ8IV13 435 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 HACE1Q8IYU2 909 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 NDUFAF2Q8N183 169 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 STKLD1Q8NE28 680 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 FAM167BQ9BTA0 163 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 HBS1LQ9Y450 684 aaKnown RBP20.53■□□□□ 0.88
SOX2-201ENST00000325404 PLXNA1Q9UIW2 1896 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 RBM47A0AV96 593 aaKnown RBP20.53■□□□□ 0.88
SOX2-201ENST00000325404 B2RBV5 119 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 METTL18O95568 372 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 SERPINA6P08185 405 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 INSRRP14616 1297 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 FDFT1P37268 417 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 PPP1R26Q5T8A7 1209 aaPredicted RBP20.53■□□□□ 0.88
SOX2-201ENST00000325404 FAXCQ5TGI0 409 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 ARHGAP17Q68EM7 881 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 MARK2Q7KZI7 788 aaKnown RBP20.53■□□□□ 0.88
SOX2-201ENST00000325404 UNC93AQ86WB7 457 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 TTC30AQ86WT1 665 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 ARID3BQ8IVW6 561 aaPredicted RBP20.53■□□□□ 0.88
SOX2-201ENST00000325404 TMEM130Q8N3G9 435 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 PLEKHA5Q9HAU0 1116 aa20.53■□□□□ 0.88
SOX2-201ENST00000325404 PAPSS1O43252 624 aaPredicted RBP20.52■□□□□ 0.88
SOX2-201ENST00000325404 KRT36O76013 467 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 RGS7P49802 495 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 TRMT5Q32P41 509 aaKnown RBP20.52■□□□□ 0.88
SOX2-201ENST00000325404 GJC2Q5T442 439 aaPredicted RBP20.52■□□□□ 0.88
SOX2-201ENST00000325404 MAMDC4Q6UXC1 1216 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 LRRC74BQ6ZQY2 392 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 MECRQ9BV79 373 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 CCDC106Q9BWC9 280 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 SLC13A1Q9BZW2 595 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 HESX1Q9UBX0 185 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 PLA2G4CQ9UP65 541 aa20.52■□□□□ 0.88
SOX2-201ENST00000325404 SPECC1L-ADORA2AF8WAN1 911 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 CAPN9O14815 690 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 NEBLO76041 1014 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 GRM5P41594 1212 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 RPL34P49207 117 aaKnown RBP20.52■□□□□ 0.87
SOX2-201ENST00000325404 STX3Q13277 289 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 SLC26A9Q7LBE3 791 aa20.52■□□□□ 0.87
SOX2-201ENST00000325404 PDCD7Q8N8D1 485 aaKnown RBP20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms