RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PALMDQ9NP74 551 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 NMRK1Q9NWW6 199 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 SPASTQ9UBP0 616 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 SLC12A8A0AV02 714 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 CASTOR2A6NHX0 329 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TGFB2P61812 414 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 PLIN5Q00G26 463 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 UBE3AQ05086 875 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 CHRNB3Q05901 458 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 PAWRQ96IZ0 340 aaKnown RBP11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TMEM237Q96Q45 408 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 OSMRQ99650 979 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 UBXN6Q9BZV1 441 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 CHST7Q9NS84 486 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TAS2R14Q9NYV8 317 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 CCDC159P0C7I6 412 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TGFB3P10600 412 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 CRABP2P29373 138 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 HUNKP57058 714 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 CDK16Q00536 496 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TP53BP2Q13625 1128 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 ZPBP2Q6X784 338 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 ZNF446Q9NWS9 450 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
SNRNP200-201ENST00000323853 TPBGLP0DKB5 382 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 FCGR1AP12314 374 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 INSRRP14616 1297 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 EIF4BP23588 611 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 PRKCIP41743 596 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 DPYSL3Q14195 570 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 ATP6AP1LQ52LC2 224 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 APOBEC3HQ6NTF7 200 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 PRMT9Q6P2P2 845 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 ZNF662Q6ZS27 426 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 C11orf96Q7Z7L8 435 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CENPTQ96BT3 561 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 ADGRE3Q9BY15 652 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CTNNAL1Q9UBT7 734 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 GAKO14976 1311 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 STRNO43815 780 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CD151P48509 253 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 PRIM2P49643 509 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 NCALDP61601 193 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CNTN1Q12860 1018 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 KYQ8NBH2 561 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CELF6Q96J87 481 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CDK5RAP1Q96SZ6 601 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 SYT15Q9BQS2 421 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CLPBQ9H078 707 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 SETD4Q9NVD3 440 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TRHDEQ9UKU6 1024 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 PCDHA11Q9Y5I1 949 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 FCHO1O14526 889 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TRDMT1O14717 391 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 GRIN3BO60391 1043 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 GJB6O95452 261 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TFRCP02786 760 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 SSTR1P30872 391 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 SLC34A1Q06495 639 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CSTF3Q12996 717 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CASP10Q92851 521 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TCF7L2Q9NQB0 619 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 A0A087X1B8 175 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 GP5P40197 560 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 FAAP100Q0VG06 881 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 SLC27A1Q6PCB7 646 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 FOXR1Q6PIV2 292 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 NT5DC4Q86YG4 428 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TMEM134Q9H6X4 195 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TLR8Q9NR97 1041 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TPH1P17752 444 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 ITGALP20701 1170 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 AMPD1P23109 780 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 RPA3P35244 121 aaPredicted RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 CASP5P51878 434 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 PRKAA1Q13131 559 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 LRRC8DQ7L1W4 858 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 EXOSC4Q9NPD3 245 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TUBGCP4Q9UGJ1 667 aa11.19□□□□□ -0.62
SNRNP200-201ENST00000323853 TISP43B9A030 160 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 CSDE1O75534 798 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 CCDC130P13994 396 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 PPATQ06203 517 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 OASLQ15646 514 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 FAM9CQ8IZT9 166 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MIER2Q8N344 545 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 SMARCD1Q96GM5 515 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 EMILIN2Q9BXX0 1053 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 UNKQ9C0B0 810 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms