RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PQLC1Q8N2U9 271 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ASZ1Q8WWH4 475 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 HES6Q96HZ4 224 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ZNF333Q96JL9 665 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SPRTNQ9H040 489 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 EPB41L4AQ9HCS5 686 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DYRK4Q9NR20 520 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 FBXO6Q9NRD1 293 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 KLHL3Q9UH77 587 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 GNPTGQ9UJJ9 305 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 FRMPD4Q14CM0 1322 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 NOS1APO75052 506 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TDP2O95551 362 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 IST1P53990 364 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SLC47A2Q86VL8 602 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 FAM213AQ9BRX8 229 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PLA2G12BQ9BX93 195 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LRRC4Q9HBW1 653 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 NUDT5Q9UKK9 219 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TAF6LQ9Y6J9 622 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 IGSF9BQ9UPX0 1349 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PRAMEF22A3QJZ6 481 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SNTNA6NMZ2 147 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 OXCT1P55809 520 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TOP3AQ13472 1001 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 C8orf59Q8N0T1 100 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TMEM121Q9BTD3 319 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SEMA6AQ9H2E6 1030 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 RALGAPA2Q2PPJ7 1873 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SCN10AQ9Y5Y9 1956 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 C5orf60A6NFR6 353 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SPDYE16A6NNV3 312 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 F5H423 210 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LGR5O75473 907 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 CPA3P15088 417 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LRPAP1P30533 357 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SLC16A2P36021 539 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 STAT3P40763 770 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SPDYE2Q495Y8 402 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DUPD1Q68J44 220 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ELMO2Q96JJ3 720 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TRIM62Q9BVG3 475 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 RIC8BQ9NVN3 520 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ZBTB1Q9Y2K1 713 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SPDYE2BA6NHP3 402 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 MTSS1O43312 755 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ITGAVP06756 1048 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SPDYE6P0CI01 402 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 RXRGP48443 463 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 NR2C2P49116 596 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PDK1Q15118 436 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 OTOAQ7RTW8 1153 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 IFNEQ86WN2 208 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PURBQ96QR8 312 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 CPNE1Q99829 537 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PCDH12Q9NPG4 1184 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 UNC13CQ8NB66 2214 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 CD163L1Q9NR16 1453 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 MYOFQ9NZM1 2061 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 FBP2O00757 339 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LSM8O95777 96 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LDLRP01130 860 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 YWHABP31946 246 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 AQP4P55087 323 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 SESN2P58004 480 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 ARHGAP17Q68EM7 881 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LRRC49Q8IUZ0 686 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 CENPLQ8N0S6 344 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DHRSXQ8N5I4 330 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 KLHL31Q9H511 634 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TRIM39Q9HCM9 518 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 STAP1Q9ULZ2 295 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 RIMBP2O15034 1052 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 PRKAA1Q13131 559 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 BFSP2Q13515 415 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DDB1Q16531 1140 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 LMBRD2Q68DH5 695 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 OTULINQ96BN8 352 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 TEX13BQ9BXU2 312 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 DGCR6LQ9BY27 220 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 UBE2OQ9C0C9 1292 aaKnown RBP7.24□□□□□ -1.25
SMC1A-201ENST00000322213 NEUROG2Q9H2A3 272 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 NRBP2Q9NSY0 501 aa7.24□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 MAGEC1O60732 1142 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 BMP3P12645 472 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 COX10Q12887 443 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CMPK2Q5EBM0 449 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms