RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 RAB41Q5JT25 222 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 DCLRE1AQ6PJP8 1040 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 LEKR1Q6ZMV7 388 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 DENND5BQ6ZUT9 1274 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 PNPLA1Q8N8W4 532 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 RNF139Q8WU17 664 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 RUBCNQ92622 972 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 KLF6Q99612 283 aaPredicted RBP7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 SEPT5Q99719 369 aaPredicted RBP7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 ACBD6Q9BR61 282 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 UBP1Q9NZI7 540 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 MPP6Q9NZW5 540 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 CHMP2BQ9UQN3 213 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 PCDHB7Q9Y5E2 793 aa7.26□□□□□ -1.25
LYSMD3-201ENST00000315948 TTC24A2A3L6 582 aaPredicted RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 POC1B-GALNT4F8VUJ3 575 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 MCF2LO15068 1137 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 FAM155BO75949 473 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 RARGP13631 454 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CSF2RAP15509 400 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 ITIH2P19823 946 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 GCAP28676 217 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 MAGEA4P43358 317 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 PTPN9P43378 593 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 GNGT1P63211 74 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 DUSP4Q13115 394 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 DPYSL2Q16555 572 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 LRRC26Q2I0M4 334 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CIR1Q86X95 450 aaPredicted RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 MIB1Q86YT6 1006 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 SPATA2LQ8IUW3 424 aaPredicted RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 DQX1Q8TE96 717 aaKnown RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 NT5C3BQ969T7 300 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 UBN1Q9NPG3 1134 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 MTRF1LQ9UGC7 380 aaKnown RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 LCMT1Q9UIC8 334 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TPX2Q9ULW0 747 aaKnown RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CLUHO75153 1309 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TSC2P49815 1807 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 PCSK1P29120 753 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 SLC8A3P57103 927 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 AP1B1Q10567 949 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 AUHQ13825 339 aaKnown RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CTXN3Q4LDR2 81 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 BOLA3Q53S33 107 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 SLC9A4Q6AI14 798 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 SLC39A5Q6ZMH5 540 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TMEM86AQ8N2M4 240 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TTC39CQ8N584 583 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CCNYQ8ND76 341 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 AGAP3Q96P47 875 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 COLEC11Q9BWP8 271 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 ADAM28Q9UKQ2 775 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 FARP1Q9Y4F1 1045 aaPredicted RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TNFRSF10BO14763 440 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 UGT1A9O60656 530 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TTC4O95801 387 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CETN2P41208 172 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 IFNAR2P48551 515 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 PGGT1BP53609 377 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 COPS2P61201 443 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 EFHC1Q5JVL4 640 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 PPP1R2P3Q6NXS1 205 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CES3Q6UWW8 571 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 LRRC31Q6UY01 552 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 OTOP2Q7RTS6 562 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 KDELC2Q7Z4H8 507 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 C14orf80Q86SX3 495 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 RNF34Q969K3 372 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 APOL2Q9BQE5 337 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 TSEN34Q9BSV6 310 aaKnown RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 VPS37BQ9H9H4 285 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 UGT1A7Q9HAW7 530 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 UGT1A10Q9HAW8 530 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 UGT1A8Q9HAW9 530 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 PLAC1Q9HBJ0 212 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 ETNK1Q9HBU6 452 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 PPANQ9NQ55 473 aaKnown RBP7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 GMIPQ9P107 970 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 CDY1Q9Y6F8 540 aa7.25□□□□□ -1.25
LYSMD3-201ENST00000315948 FRMPD3Q5JV73 1810 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 DAB1O75553 588 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 GJB3O75712 270 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 GALTP07902 379 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 CPB1P15086 417 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 NOS2P35228 1153 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 PTPN7P35236 360 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 ADRA1BP35368 520 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 RWDD4Q6NW29 188 aaKnown RBP7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 PRPF39Q86UA1 669 aaKnown RBP7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 METTL23Q86XA0 190 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 NAT8LQ8N9F0 302 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 GRK7Q8WTQ7 553 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 KCTD13Q8WZ19 329 aa7.24□□□□□ -1.25
LYSMD3-201ENST00000315948 ATP2A3Q93084 1043 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms