RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SPAG6O75602 509 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 HPGDP15428 266 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 GALNTL6Q49A17 601 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 ELOA2Q8IYF1 753 aaPredicted RBP13.88□□□□□ -0.19
RFFL-201ENST00000315249 VPS37AQ8NEZ2 397 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 ENGASEQ8NFI3 743 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 MYLPFQ96A32 169 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 NPR3P17342 541 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 XRCC4Q13426 336 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 CAPSQ13938 189 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 KCNK18Q7Z418 384 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 TRAPPC5Q8IUR0 188 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 PRPF18Q99633 342 aaKnown RBP13.88□□□□□ -0.19
RFFL-201ENST00000315249 GRID1Q9ULK0 1009 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 DUSP10Q9Y6W6 482 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 TNFSF13BQ9Y275 285 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 GMNCA6NCL1 334 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 CXorf40AQ8TE69 158 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 MYOCQ99972 504 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 BBS2Q9BXC9 721 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 BTBD7Q9P203 1132 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
RFFL-201ENST00000315249 MTA2O94776 668 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 PPP1R16AQ96I34 528 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 FAR2Q96K12 515 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 CEP19Q96LK0 163 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 CDT1Q9H211 546 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 UTP6Q9NYH9 597 aaKnown RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 MYO1GB0I1T2 1018 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 HALP42357 657 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 GRIK3Q13003 919 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 ZNF571Q7Z3V5 609 aaPredicted RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 TMEM159Q96B96 161 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 MAGED4Q96JG8 741 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 ATP6V1G3Q96LB4 118 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 LRRC40Q9H9A6 602 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 CDH9Q9ULB4 789 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 MLNP12872 115 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 RPL9P32969 192 aaKnown RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 UGCGQ16739 394 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 TRMT13Q9NUP7 481 aaKnown RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 SCHIP1Q9P0W5 487 aaPredicted RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 CALCAP01258 141 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 ZC3H12AQ5D1E8 599 aaKnown RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 SPOCD1Q6ZMY3 1216 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 C1orf186Q6ZWK4 172 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 STRA8Q7Z7C7 330 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 SPATA20Q8TB22 786 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 MEI4A8MW99 385 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 NCAM2O15394 837 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 GZMAP12544 262 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 BRCC3P46736 316 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 MRPL1Q9BYD6 325 aaKnown RBP13.87□□□□□ -0.19
RFFL-201ENST00000315249 WWP1Q9H0M0 922 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 PADI3Q9ULW8 664 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 SHOC2Q9UQ13 582 aa13.87□□□□□ -0.19
RFFL-201ENST00000315249 KCNK1O00180 336 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 GJB6O95452 261 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 HDAC4P56524 1084 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 DLG4P78352 724 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 ARMC12Q5T9G4 340 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 KCNB2Q92953 911 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 TTPALQ9BTX7 342 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 UNKQ9C0B0 810 aaKnown RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 ZCCHC2Q9C0B9 1178 aaKnown RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 RIC8BQ9NVN3 520 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 GGT7Q9UJ14 662 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 F8VP50 259 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 ITGB5P18084 799 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 SYTL1Q8IYJ3 562 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 OR2W6PQ8NHA6 318 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 B4GALNT2Q8NHY0 566 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 NCKAP1LP55160 1127 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 DENND1BQ6P3S1 775 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 GNG14A0A1W2PPG7 69 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 INSCQ1MX18 579 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 USP45Q70EL2 814 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 DRG1Q9Y295 367 aaKnown RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 SMIM35A0A1B0GVV1 85 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 ERI2A8K979 691 aaKnown RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 LBX2Q6XYB7 198 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 MCOLN2Q8IZK6 566 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 ARMC2Q8NEN0 867 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 C2orf49Q9BVC5 232 aaPredicted RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 A0A0A6YYK5 440 aaPredicted RBP13.86□□□□□ -0.19
RFFL-201ENST00000315249 EVPLLA8MZ36 301 aa13.86□□□□□ -0.19
RFFL-201ENST00000315249 IL10P22301 178 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms