RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CSPG4P5Q96PW8 444 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 TBCBQ99426 244 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 ZNF670Q9BS34 389 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.19■■□□□ 1.78
HOXB3-201ENST00000311626 DONSONQ9NYP3 566 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 SEPT10Q9P0V9 454 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 KIAA1257Q9ULG3 409 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 OTOFQ9HC10 1997 aa26.19■■□□□ 1.78
HOXB3-201ENST00000311626 CDKL3Q8IVW4 592 aaPredicted RBP26.18■■□□□ 1.78
HOXB3-201ENST00000311626 FBXO41Q8TF61 875 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 OPTNQ96CV9 577 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 DTLQ9NZJ0 730 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 DNAH12Q6ZR08 3092 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 TRDMT1O14717 391 aaKnown RBP26.18■■□□□ 1.78
HOXB3-201ENST00000311626 KRT38O76015 456 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 RABGGTBP53611 331 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 NBPF20Q3BBV1 942 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 MARCH8Q5T0T0 291 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 LGSNQ5TDP6 509 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 TP53INP2Q8IXH6 220 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 TEX9Q8N6V9 391 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 PDCD7Q8N8D1 485 aaKnown RBP26.18■■□□□ 1.78
HOXB3-201ENST00000311626 SHKBP1Q8TBC3 707 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 SPDL1Q96EA4 605 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 FAXDC2Q96IV6 333 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 C16orf70Q9BSU1 422 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 DCLRE1BQ9H816 532 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 ZNF180Q9UJW8 692 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 MDM4O15151 490 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 PGM1P36871 562 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 TEX44Q53QW1 395 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 RILPQ96NA2 401 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 SETD4Q9NVD3 440 aa26.18■■□□□ 1.78
HOXB3-201ENST00000311626 FAM159BA6NKW6 160 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 H3BRB1 525 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 RPL10AP62906 217 aaKnown RBP26.17■■□□□ 1.78
HOXB3-201ENST00000311626 OCRLQ01968 901 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 THOC5Q13769 683 aaKnown RBP26.17■■□□□ 1.78
HOXB3-201ENST00000311626 UBAP2LQ14157 1087 aaKnown RBP26.17■■□□□ 1.78
HOXB3-201ENST00000311626 HEATR6Q6AI08 1181 aaKnown RBP26.17■■□□□ 1.78
HOXB3-201ENST00000311626 ANO7Q6IWH7 933 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 STKLD1Q8NE28 680 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 OSBPL1AQ9BXW6 950 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 TUT1Q9H6E5 874 aaKnown RBP26.17■■□□□ 1.78
HOXB3-201ENST00000311626 GOLGA2P5Q9HBQ8 144 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 ITM2AO43736 263 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 NEBLO76041 1014 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 RARBP10826 455 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 LAMC2Q13753 1193 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 NCBP2-AS2Q69YL0 99 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.17■■□□□ 1.78
HOXB3-201ENST00000311626 FAM161BQ96MY7 647 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 NMRK1Q9NWW6 199 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 PCDHA11Q9Y5I1 949 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 PSAT1Q9Y617 370 aa26.17■■□□□ 1.78
HOXB3-201ENST00000311626 DCAF8L1A6NGE4 600 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 CAPN9O14815 690 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 KCNA4P22459 653 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 MAGEA3P43357 314 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 R3HDM1Q15032 1099 aaKnown RBP26.16■■□□□ 1.78
HOXB3-201ENST00000311626 GRIK4Q16099 956 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 MUM1Q2TAK8 710 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 MCUQ8NE86 351 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 NXF3Q9H4D5 531 aaKnown RBP26.16■■□□□ 1.78
HOXB3-201ENST00000311626 SIRPGQ9P1W8 387 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 MAGED2Q9UNF1 606 aaPredicted RBP26.16■■□□□ 1.78
HOXB3-201ENST00000311626 GCATO75600 419 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 SMNDC1O75940 238 aaKnown RBP eCLIP26.16■■□□□ 1.78
HOXB3-201ENST00000311626 HOXA11P31270 313 aaPredicted RBP26.16■■□□□ 1.78
HOXB3-201ENST00000311626 CCNFP41002 786 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 IFNLR1Q8IU57 520 aaPredicted RBP26.16■■□□□ 1.78
HOXB3-201ENST00000311626 BATF3Q9NR55 127 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 WASF2Q9Y6W5 498 aa26.16■■□□□ 1.78
HOXB3-201ENST00000311626 TBX10O75333 385 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 BPGMP07738 259 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 MGAT1P26572 445 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 GRM5P41594 1212 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 MAGEA6P43360 314 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 DPYSL2Q16555 572 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 RBM15BQ8NDT2 890 aaKnown RBP26.15■■□□□ 1.78
HOXB3-201ENST00000311626 DNAJC9Q8WXX5 260 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 FAM149B1Q96BN6 582 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 SLC24A3Q9HC58 644 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 MEI4A8MW99 385 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 KLF11O14901 512 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 SPTLC1O15269 473 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 GTF2A2P52657 109 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 POU5F1BQ06416 359 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 AP1B1Q10567 949 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 BLMHQ13867 455 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 KRT72Q14CN4 511 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 ATG16L1Q676U5 607 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.15■■□□□ 1.78
HOXB3-201ENST00000311626 PPP1R14CQ8TAE6 165 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 SLC2A14Q8TDB8 520 aa26.15■■□□□ 1.78
HOXB3-201ENST00000311626 PRR5-ARHGAP8B1AHC4 643 aa26.14■■□□□ 1.78
HOXB3-201ENST00000311626 CXCL11O14625 94 aa26.14■■□□□ 1.78
HOXB3-201ENST00000311626 HNRNPCL1O60812 293 aaKnown RBP26.14■■□□□ 1.78
HOXB3-201ENST00000311626 TUBP50607 506 aa26.14■■□□□ 1.78
HOXB3-201ENST00000311626 ARHGAP8P85298 464 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms