RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SLITRK1Q96PX8 696 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 ADAM30Q9UKF2 790 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
SNED1-201ENST00000310397 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
SNED1-201ENST00000310397 RXRGP48443 463 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 TRAF2Q12933 501 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SPATA17Q96L03 361 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 APOL4Q9BPW4 351 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 CNGB3Q9NQW8 809 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SFMBT1Q9UHJ3 866 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 PGAM1P18669 254 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SLC26A2P50443 739 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 HPCAP84074 193 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 AUHQ13825 339 aaKnown RBP13.5□□□□□ -0.25
SNED1-201ENST00000310397 EARS2Q5JPH6 523 aaKnown RBP13.5□□□□□ -0.25
SNED1-201ENST00000310397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNED1-201ENST00000310397 MRPS26Q9BYN8 205 aaKnown RBP13.5□□□□□ -0.25
SNED1-201ENST00000310397 PRRG3Q9BZD7 231 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 GPAMQ9HCL2 828 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 HACD1B0YJ81 288 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 INPP4BO15327 924 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 CHADO15335 359 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 TBC1D12O60347 775 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 RIPK1Q13546 671 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 ARCQ7LC44 396 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 EXOC3L1Q86VI1 746 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 ZDHHC15Q96MV8 337 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 UGT2B28Q9BY64 529 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 LRMDAQ9H2I8 198 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 TPRKBQ9Y3C4 175 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 NCANO14594 1321 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 KATNA1O75449 491 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 CCT8P50990 548 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 ATP6V0D2Q8N8Y2 350 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 C19orf18Q8NEA5 215 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 TMCC3Q9ULS5 477 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SYNDIG1LA6NDD5 238 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SPANXN2Q5MJ10 180 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 RRN3Q9NYV6 651 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SPASTQ9UBP0 616 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 STX7O15400 261 aaKnown RBP13.5□□□□□ -0.25
SNED1-201ENST00000310397 KCNJ2P63252 427 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 APOL5Q9BWW9 433 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 SPATA16Q9BXB7 569 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 TULP2O00295 520 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 MAP3K6O95382 1288 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 HK2P52789 917 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 IQCKQ8N0W5 287 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 DMAP1Q9NPF5 467 aaPredicted RBP13.5□□□□□ -0.25
SNED1-201ENST00000310397 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
SNED1-201ENST00000310397 CRTAMO95727 393 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 MMP13P45452 471 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 PRKD2Q9BZL6 878 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CYP4F12Q9HCS2 524 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 GPRC5DQ9NZD1 345 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 DAPK2Q9UIK4 370 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 PHGDHO43175 533 aaKnown RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 IFNA14P01570 189 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 ITGAVP06756 1048 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 ODC1P11926 461 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CAMK1DQ8IU85 385 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CLVS1Q8IUQ0 354 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 BLOC1S5Q8TDH9 187 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 ACMSDQ8TDX5 336 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 C19orf60Q96EN9 201 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CINPQ9BW66 212 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 KRCC1Q9NPI7 259 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 BARX2Q9UMQ3 279 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 DGUOKQ16854 277 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 ZDHHC13Q8IUH4 622 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 ATG16L2Q8NAA4 619 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 SLC25A23Q9BV35 468 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 TBC1D13Q9NVG8 400 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 SHOX2O60902 331 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 SHBGP04278 402 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CDH17Q12864 832 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 MAD2L1Q13257 205 aaPredicted RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 DUPD1Q68J44 220 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 FAM45BPQ6NSW5 357 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 MARK2Q7KZI7 788 aaKnown RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 OR8H2Q8N162 312 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 DHRSXQ8N5I4 330 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CCDC28BQ9BUN5 200 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 MOSPD1Q9UJG1 213 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 TRHDEQ9UKU6 1024 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 SUPT20HL2P0C7V6 817 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 EPS8Q12929 822 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 MIER2Q8N344 545 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 CDRT15Q96T59 188 aa13.49□□□□□ -0.25
SNED1-201ENST00000310397 AGO4Q9HCK5 861 aaKnown RBP13.49□□□□□ -0.25
SNED1-201ENST00000310397 PDGFCQ9NRA1 345 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms