RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CFAP69A5D8W1 941 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 POC1B-GALNT4F8VUJ3 575 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 CHADO15335 359 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 GCATO75600 419 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 VAV1P15498 845 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 DRD4P21917 467 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 ADRA1BP35368 520 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 MAGEA6P43360 314 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 RNASELQ05823 741 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 DEUP1Q05D60 604 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 DPYSQ14117 519 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 GPNMBQ14956 572 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PM20D1Q6GTS8 502 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 OVOS1Q6IE37 1185 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 TADA2BQ86TJ2 420 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 CAND1Q86VP6 1230 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 SRRM1Q8IYB3 904 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 REM2Q8IYK8 340 aaPredicted RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 PDIK1LQ8N165 341 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 RNF139Q8WU17 664 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 UROC1Q96N76 676 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 LGMNQ99538 433 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 CCDC77Q9BR77 488 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 TSEN34Q9BSV6 310 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 PLAC1Q9HBJ0 212 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 ETNK1Q9HBU6 452 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PAK5Q9P286 719 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 RCOR3Q9P2K3 495 aaPredicted RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 STAP1Q9ULZ2 295 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 TEX264Q9Y6I9 313 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 ANKRD65E5RJM6 399 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SMAPO00193 183 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 MFSD11O43934 449 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 LTFP02788 710 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SKIP12755 728 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 NCAM1P13591 858 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 BRAFP15056 766 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 ZFXP17010 805 aaPredicted RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 ARL4AP40617 200 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 ELK3P41970 407 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PGFP49763 221 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 DSC1Q08554 894 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SEMA3BQ13214 749 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 LRRC14Q15048 493 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 TMED2Q15363 201 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PKN2Q16513 984 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SLC24A5Q71RS6 500 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 TRABD2AQ86V40 505 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 METTL23Q86XA0 190 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 FBF1Q8TES7 1133 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PGAP3Q96FM1 320 aaPredicted RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 SLC9A7Q96T83 725 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 CCDC134Q9H6E4 229 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 FBXW11Q9UKB1 542 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 NLRC5Q86WI3 1866 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.32
USP47-201ENST00000305481 C5orf60A6NFR6 353 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 EBAG9O00559 213 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 CREB3O43889 395 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 EOMESO95936 686 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 C1QAP02745 245 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 SCAPQ12770 1279 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 ZNF534Q76KX8 674 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 CDKL3Q8IVW4 592 aaPredicted RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 COLGALT2Q8IYK4 626 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 RIBC1Q8N443 379 aaPredicted RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 ATP11CQ8NB49 1132 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 CHMP6Q96FZ7 201 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 DHRS4Q9BTZ2 278 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 KIF9Q9HAQ2 790 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 MLXIPLQ9NP71 852 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 STARD7Q9NQZ5 370 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 DNAJB4Q9UDY4 337 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 CHMP2BQ9UQN3 213 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 PTPRDP23468 1912 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 A0A1W2PPM1 405 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 RASA4BC9J798 803 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 CAPN9O14815 690 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 DCLK1O15075 740 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 RASA4O43374 803 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 APRTP07741 180 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 OR4Q2P0C623 313 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 ATP5DP30049 168 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 GRIA1P42261 906 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 IFNAR2P48551 515 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 PRKD1Q15139 912 aaPredicted RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 RASA2Q15283 850 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 BSPRYQ5W0U4 402 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 RFX8Q6ZV50 586 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 MGARPQ8TDB4 240 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 NTAN1Q96AB6 310 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 COLEC11Q9BWP8 271 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 ACSS3Q9H6R3 686 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 DDIT4Q9NX09 232 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 DSEQ9UL01 958 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 SNX10Q9Y5X0 201 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms