RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MOCS2O96007 188 aaPredicted RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 RFC2P35250 354 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 HARS2P49590 506 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 RNF220Q5VTB9 566 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 MARK2Q7KZI7 788 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 RCOR2Q8IZ40 523 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 NUP93Q8N1F7 819 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 CDK5RAP1Q96SZ6 601 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 IGFLR1Q9H665 355 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 OSGEPQ9NPF4 335 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 DAPK2Q9UIK4 370 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 SF3B1O75533 1304 aaKnown RBP eCLIP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 GTPBP10A4D1E9 387 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 DNM1LO00429 736 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 LIN7AO14910 233 aaPredicted RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 CSDE1O75534 798 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 WDR47O94967 919 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 LYPLA2O95372 231 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 PGM3O95394 542 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 C21orf59P57076 290 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 SESN2P58004 480 aaPredicted RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 RRP1BQ14684 758 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 TSHZ1Q6ZSZ6 1077 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 CLVS1Q8IUQ0 354 aaPredicted RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 JADE3Q92613 823 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 THG1LQ9NWX6 298 aaKnown RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 UXTQ9UBK9 157 aaPredicted RBP11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 SNX13Q9Y5W8 968 aa11.71□□□□□ -0.53
NPC1L1-201ENST00000289547 ATXN2Q99700 1313 aaKnown RBP11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 DPPA5A6NC42 116 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 PEX10O60683 326 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 MREGQ8N565 214 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 ZBTB18Q99592 522 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 TXNRD2Q9NNW7 524 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 BFARQ9NZS9 450 aa11.71□□□□□ -0.54
NPC1L1-201ENST00000289547 SHOX2O60902 331 aaPredicted RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 TNFAIP8O95379 198 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 AKAP5P24588 427 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 SOX10P56693 466 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 HTRA3P83110 453 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 NME3Q13232 169 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 BLMHQ13867 455 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 ZNF555Q8NEP9 628 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 PARVAQ9NVD7 372 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 WHRNQ9P202 907 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 ANGPT2O15123 496 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 KRT36O76013 467 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 PFKMP08237 780 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 CXCL8P10145 99 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 TUFMP49411 452 aaKnown RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 CDH6P55285 790 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 NCALDP61601 193 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 RAB30Q15771 203 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 MROH9Q5TGP6 573 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 ZNF677Q86XU0 584 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 RNF135Q8IUD6 432 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 OMA1Q96E52 524 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 MTMR12Q9C0I1 747 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 ARMCX1Q9P291 453 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 GRID1Q9ULK0 1009 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 CASZ1Q86V15 1759 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 SCN7AQ01118 1682 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 EPAS1Q99814 870 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 TJP1Q07157 1748 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 E2F8A0AVK6 867 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 PJA2O43164 708 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 ADH1AP07327 375 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC2A3P11169 496 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 KCNA2P16389 499 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 CCND3P30281 292 aaPredicted RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 AVPR1AP37288 418 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 GSCP56915 257 aaPredicted RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 CENPCQ03188 943 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 UBE3AQ05086 875 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 SEZ6Q53EL9 994 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 SETD3Q86TU7 594 aaPredicted RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 UCMAQ8WVF2 138 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 IPPQ9Y573 584 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 CDY1Q9Y6F8 540 aa11.7□□□□□ -0.54
NPC1L1-201ENST00000289547 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 BGNP21810 368 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 PPARGP37231 505 aaPredicted RBP11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 SERPINB9P50453 376 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 MAP3K7CLP57077 242 aa11.69□□□□□ -0.54
NPC1L1-201ENST00000289547 TLE2Q04725 743 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms