RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 HMGCRP04035 888 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 MPOP05164 745 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 ERVK-10P10266 1014 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 CACHD1Q5VU97 1274 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 OTOP1Q7RTM1 612 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 KCNMB4Q86W47 210 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 ADAM32Q8TC27 787 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 POMKQ9H5K3 350 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 STARD13Q9Y3M8 1113 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 MAFGO15525 162 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 HNRNPRO43390 633 aaKnown RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 ALADP13716 330 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 ITGB6P18564 788 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 AMPD2Q01433 879 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 VEPH1Q14D04 833 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 FBXO16Q8IX29 292 aaPredicted RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 PCDH20Q8N6Y1 951 aaKnown RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 ANKRD27Q96NW4 1050 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 RNF19AQ9NV58 838 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 CRLS1Q9UJA2 301 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 EME2A4GXA9 379 aaPredicted RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 C19orf81C9J6K1 198 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 LGR5O75473 907 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 LSM8O95777 96 aaKnown RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 C6orf222P0C671 652 aaPredicted RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 C21orf59P57076 290 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 SCUBE3Q8IX30 993 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 GANQ9H2C0 597 aa15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
SHROOM4-201ENST00000289292 TNFAIP8O95379 198 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 PPP3CAQ08209 521 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 ZNF772Q68DY9 489 aaPredicted RBP15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 DHFR2Q86XF0 187 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 MIB1Q86YT6 1006 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 BAP1Q92560 729 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 EDEM1Q92611 657 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 CENPTQ96BT3 561 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 APBA2Q99767 749 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 ZNF518BQ9C0D4 1074 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 TSPAN16Q9UKR8 245 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 BCL10O95999 233 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 VAC14Q08AM6 782 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 DPYSL3Q14195 570 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 FOPNLQ96NB1 174 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 TMEM245Q9H330 911 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 CAPN10Q9HC96 672 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 NMRK2Q9NPI5 230 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 GGA3Q9NZ52 723 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 C2orf71A6NGG8 1288 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 FAM20BO75063 409 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 RBL1P28749 1068 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 GRTP1Q5TC63 336 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 RDM1Q8NG50 284 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 XPNPEP3Q9NQH7 507 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 GAKO14976 1311 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 SPATA31A1Q5TZJ5 1347 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 LRRC10BA6NIK2 292 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 CYB561D2O14569 222 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 GUCA1CO95843 209 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 MUTP22033 750 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 NDST1P52848 882 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 YTHDF3Q7Z739 585 aaKnown RBP15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 C6orf62Q9GZU0 229 aaPredicted RBP15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 ATXN3LQ9H3M9 355 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 SLCO1B3Q9NPD5 702 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 SAR1AQ9NR31 198 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 NCKIPSDQ9NZQ3 722 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 FASP25445 335 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 SHMT1P34896 483 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 ARHGAP17Q68EM7 881 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 ANKS3Q6ZW76 656 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 RPRD1AQ96P16 312 aaPredicted RBP15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 HACL1Q9UJ83 578 aa15.72■□□□□ 0.11
SHROOM4-201ENST00000289292 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 A0A096LPK6 155 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 CAP2P40123 477 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 LAMTOR4Q0VGL1 99 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 RNF43Q68DV7 783 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 EFL1Q7Z2Z2 1120 aaKnown RBP15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 LUZP2Q86TE4 346 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 EXOC3L1Q86VI1 746 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 MTMR9Q96QG7 549 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 ACOX2Q99424 681 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 MRGBPQ9NV56 204 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 STX7O15400 261 aaKnown RBP15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 SOX6P35712 828 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 CHI3L1P36222 383 aaPredicted RBP15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 ARHGEF7Q14155 803 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 CCNJLQ8IV13 435 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 GMCL1P1Q8NEA9 526 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 OMA1Q96E52 524 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 PPP1R2P1Q96PQ5 205 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 SYBUQ9NX95 663 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 CROTQ9UKG9 612 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 ASTN1O14525 1302 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 ZNF839A8K0R7 811 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 C2CD2LO14523 706 aa15.71■□□□□ 0.11
SHROOM4-201ENST00000289292 PGAM1P18669 254 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms