RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 PIK3R3Q92569 461 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 SLC6A15Q9H2J7 730 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 LRRC40Q9H9A6 602 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 CHST12Q9NRB3 414 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 RSL1D1O76021 490 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 AGTP01019 485 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 NOS2P35228 1153 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 GPR139Q6DWJ6 353 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 DGLUCYQ7Z3D6 616 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 OR52L1Q8NGH7 329 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 IP6K1Q92551 441 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 CCSER2Q9H7U1 834 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 M0R036 132 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 TOP3BO95985 862 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 GLRBP48167 497 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 PTGFRNQ9P2B2 879 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 LIMD1Q9UGP4 676 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 VPS9D1Q9Y2B5 631 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 PCDHB7Q9Y5E2 793 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 ZSCAN5CA6NGD5 496 aaPredicted RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 THRAP10827 490 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 HALP42357 657 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 PARP8Q8N3A8 854 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 TFB1MQ8WVM0 346 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 ZSCAN5AQ9BUG6 496 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 PUS3Q9BZE2 481 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 PCDH18Q9HCL0 1135 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 HEY2Q9UBP5 337 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 SUCOQ9UBS9 1254 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 RTN2O75298 545 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 VPS4BO75351 444 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 ITIH1P19827 911 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 GRK5P34947 590 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 DEFA5Q01523 94 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 XRCC4Q13426 336 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 ARL6IP4Q66PJ3 421 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 NAT14Q8WUY8 206 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 HPS1Q92902 700 aa16.15■□□□□ 0.18
UBR3-201ENST00000272793 RSL24D1Q9UHA3 163 aaKnown RBP16.15■□□□□ 0.18
UBR3-201ENST00000272793 MDFIC2A0A1B0GVS7 189 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 NFKB1P19838 968 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 WEE1P30291 646 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 NR1D2Q14995 579 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
UBR3-201ENST00000272793 EXOC3L1Q86VI1 746 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 OR7A2PQ8NGA2 310 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 RAD17O75943 681 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 RFX4Q33E94 735 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 CIR1Q86X95 450 aaPredicted RBP16.14■□□□□ 0.17
UBR3-201ENST00000272793 TDRD5Q8NAT2 981 aaKnown RBP16.14■□□□□ 0.17
UBR3-201ENST00000272793 MYLPFQ96A32 169 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 COL26A1Q96A83 441 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 SNX7Q9UNH6 387 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 ADGRG1Q9Y653 693 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 NR6A1Q15406 480 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 TDRD1Q9BXT4 1180 aaKnown RBP16.14■□□□□ 0.17
UBR3-201ENST00000272793 PPP1R13LQ8WUF5 828 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 AP3S1Q92572 193 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 CCDC126Q96EE4 140 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 GRIP2Q9C0E4 1043 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 HOXC10Q9NYD6 342 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 MAPRE3Q9UPY8 281 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 BNIP2Q12982 314 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 EXOC2Q96KP1 924 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 GPN1Q9HCN4 374 aaPredicted RBP16.14■□□□□ 0.17
UBR3-201ENST00000272793 ZNF302Q9NR11 478 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 FBXO10Q9UK96 956 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 A0A0G2JPF8 293 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 HNRNPCL3B7ZW38 293 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 FOXP2O15409 715 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 HNRNPCL4P0DMR1 293 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 CBX3Q13185 183 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 UNC13DQ70J99 1090 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.14■□□□□ 0.17
UBR3-201ENST00000272793 PEX5LQ8IYB4 626 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 TRAPPC9Q96Q05 1148 aa16.14■□□□□ 0.17
UBR3-201ENST00000272793 PLA2G6O60733 806 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 COPZ1P61923 177 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 PIGHQ14442 188 aaPredicted RBP16.13■□□□□ 0.17
UBR3-201ENST00000272793 PFKFB3Q16875 520 aaPredicted RBP16.13■□□□□ 0.17
UBR3-201ENST00000272793 Q4G0T1 1027 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 SEMA4DQ92854 862 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 CLN6Q9NWW5 311 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 ADGRL1O94910 1474 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 MSH4O15457 936 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 TNFAIP8O95379 198 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 HMBOX1Q6NT76 420 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 AFTPHQ6ULP2 937 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 CXXC5Q7LFL8 322 aaKnown RBP16.13■□□□□ 0.17
UBR3-201ENST00000272793 KRT35Q92764 455 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 MAML3Q96JK9 1138 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 KCNN2Q9H2S1 579 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 ANO9A1A5B4 782 aa16.13■□□□□ 0.17
UBR3-201ENST00000272793 METTL21EPA6NDL7 271 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms