RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 THAP2Q9H0W7 228 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 EPC1Q9H2F5 836 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 MFSD1Q9H3U5 465 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 CCSER2Q9H7U1 834 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 TBC1D17Q9HA65 648 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 GKN1Q9NS71 199 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 THG1LQ9NWX6 298 aaKnown RBP13.23□□□□□ -0.29
SGCE-201ENST00000265735 OSER1Q9NX31 292 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 AMFRQ9UKV5 643 aa13.23□□□□□ -0.29
SGCE-201ENST00000265735 TARSL2A2RTX5 802 aaKnown RBP13.22□□□□□ -0.29
SGCE-201ENST00000265735 CCDC151A5D8V7 595 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 PDE2AO00408 941 aaPredicted RBP13.22□□□□□ -0.29
SGCE-201ENST00000265735 ERLIN1O75477 346 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 RHOXF2BP0C7M4 288 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 CXCR5P32302 372 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 PSEN1P49768 467 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 BHLHA9Q7RTU4 235 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 SCD5Q86SK9 330 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 SCML4Q8N228 414 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 ZFRQ96KR1 1074 aaKnown RBP13.22□□□□□ -0.29
SGCE-201ENST00000265735 PCDHB18PQ96TA0 734 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 PSMB7Q99436 277 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 RAB21Q9UL25 225 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 CPQQ9Y646 472 aa13.22□□□□□ -0.29
SGCE-201ENST00000265735 A0A1W2PQH9 124 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 KANSL1LA0AUZ9 987 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 LEFTY2O00292 366 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 PI15O43692 258 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 TLR5O60602 858 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 GABBR2O75899 941 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 GPD2P43304 727 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 RPL34P49207 117 aaKnown RBP13.21□□□□□ -0.29
SGCE-201ENST00000265735 TKTL1P51854 596 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 ACAD10Q6JQN1 1059 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 PMF1Q6P1K2 205 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 TPRG1Q6ZUI0 275 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 TMEM105Q8N8V8 129 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 SPATA4Q8NEY3 305 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 FLCNQ8NFG4 579 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 OSCP1Q8WVF1 389 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 DDX1Q92499 740 aaKnown RBP13.21□□□□□ -0.29
SGCE-201ENST00000265735 ARHGEF26Q96DR7 871 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 OSBPL6Q9BZF3 934 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 ACP6Q9NPH0 428 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 HPS4Q9NQG7 708 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
SGCE-201ENST00000265735 GTSE1Q9NYZ3 720 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 CTTNBP2NLQ9P2B4 639 aa13.21□□□□□ -0.29
SGCE-201ENST00000265735 M0QYV0 167 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 ATP8B1O43520 1251 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 ZBED1O96006 694 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 GNA15P30679 374 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.3
SGCE-201ENST00000265735 TNK2Q07912 1038 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 C2orf54Q08AI8 447 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 RUNX3Q13761 415 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 CLEC16AQ2KHT3 1053 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 WDR93Q6P2C0 686 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 TRIM72Q6ZMU5 477 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 NT5DC3Q86UY8 548 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 PJA1Q8NG27 643 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.3
SGCE-201ENST00000265735 RUBCNQ92622 972 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 TRIM11Q96F44 468 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 MSANTD3Q96H12 275 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 HSFY1Q96LI6 401 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 OSGEPQ9NPF4 335 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 CNGB3Q9NQW8 809 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.3
SGCE-201ENST00000265735 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.3
SGCE-201ENST00000265735 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
SGCE-201ENST00000265735 MAN2B1O00754 1011 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 KCNK3O14649 394 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 MED7O43513 233 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
SGCE-201ENST00000265735 MTA2O94776 668 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 TBX18O95935 607 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 MBL2P11226 248 aaPredicted RBP13.2□□□□□ -0.3
SGCE-201ENST00000265735 RARGP13631 454 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 COL9A1P20849 921 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
SGCE-201ENST00000265735 DNA2P51530 1060 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 NUBP1P53384 320 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 ADIGQ0VDE8 80 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 FZD5Q13467 585 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 PDGFRLQ15198 375 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 TRIM68Q6AZZ1 485 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms