RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SMOC2Q9H3U7 446 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 ASAH2Q9NR71 780 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 GKN1Q9NS71 199 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 MARCH2Q9P0N8 246 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 UXTQ9UBK9 157 aaPredicted RBP10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 LCMT1Q9UIC8 334 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 MTCH2Q9Y6C9 303 aa10.13□□□□□ -0.79
SNRNP40-201ENST00000263694 BRWD1Q9NSI6 2320 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SLC12A8A0AV02 714 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 LRRD1A4D1F6 860 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 C3orf70A6NLC5 250 aaPredicted RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 MOSPD3O75425 235 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 RHOP08100 348 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 GBP1P32455 592 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 ADRA1BP35368 520 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 CXCR3P49682 368 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 KCNQ1P51787 676 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 DLX2Q07687 328 aaPredicted RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 ADCY2Q08462 1091 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 EIF4EBP2Q13542 120 aaPredicted RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 ERMARDQ5T6L9 678 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 MFSD7Q6UXD7 560 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 EP400NLQ6ZTU2 488 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 CREG2Q8IUH2 290 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 CCDC50Q8IVM0 306 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 KATNAL2Q8IYT4 538 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 MICALL1Q8N3F8 863 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 ARL14EPQ8N8R7 260 aaPredicted RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 MAB21L3Q8N8X9 362 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 TTC16Q8NEE8 873 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 PDZD8Q8NEN9 1154 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SHKBP1Q8TBC3 707 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 HDAC7Q8WUI4 952 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 ING5Q8WYH8 240 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SMG7Q92540 1137 aaKnown RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 PGAP3Q96FM1 320 aaPredicted RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 HEMGNQ9BXL5 484 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 TKTL2Q9H0I9 626 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SMG9Q9H0W8 520 aaKnown RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 DHX35Q9H5Z1 703 aaKnown RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 WDCPQ9H6R7 721 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SMPD4Q9NXE4 827 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 RRN3Q9NYV6 651 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 XPO7Q9UIA9 1087 aaKnown RBP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 CDC23Q9UJX2 597 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 FZD10Q9ULW2 581 aa10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
SNRNP40-201ENST00000263694 FAM72CH0Y354 149 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 SCAMP3O14828 347 aaKnown RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 XYLBO75191 536 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 ZRANB2O95218 330 aaKnown RBP eCLIP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 MOCS2O96007 188 aaPredicted RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 C1RP00736 705 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 F9P00740 461 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 OAS1P00973 400 aaKnown RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 KRT7P08729 469 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 HNRNPA1P09651 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 IRF1P10914 325 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 KRT10P13645 584 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 PRLRP16471 622 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 DESP17661 470 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 TCP1P17987 556 aaKnown RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 KDELR1P24390 212 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 HOXA9P31269 272 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 CDH6P55285 790 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 TBX4P57082 545 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 TEAD2Q15562 447 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 BOLA3Q53S33 107 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 PPP6R3Q5H9R7 873 aaPredicted RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 FAM72AQ5TYM5 149 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 LRRC38Q5VT99 294 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 FAM72DQ6L9T8 149 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 SND1Q7KZF4 910 aaKnown RBP eCLIP10.11□□□□□ -0.796e-6■□□□□ 9.2
SNRNP40-201ENST00000263694 Q7L0L9 218 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 FAM72BQ86X60 149 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 EFHBQ8N7U6 833 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 KCTD6Q8NC69 237 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 LRRN4CLQ8ND94 238 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 PBKQ96KB5 322 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 FCRL2Q96LA5 508 aaPredicted RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 HS3ST6Q96QI5 342 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 KCTD15Q96SI1 283 aaPredicted RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 CDCA3Q99618 268 aaPredicted RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 SLC46A2Q9BY10 475 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 NACA2Q9H009 215 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 PIDD1Q9HB75 910 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 OLA1Q9NTK5 396 aaKnown RBP10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 MTMR10Q9NXD2 777 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 ZDHHC7Q9NXF8 308 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 DNMT3LQ9UJW3 386 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 AP4E1Q9UPM8 1137 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 MRFAP1Q9Y605 127 aa10.11□□□□□ -0.79
SNRNP40-201ENST00000263694 MBL2P11226 248 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 HDCP19113 662 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 L1CAMP32004 1257 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms