RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 MRPL39Q9NYK5 338 aaKnown RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 IPPQ9Y573 584 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 CD4P01730 458 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 GEMP55040 296 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 LLGL2Q6P1M3 1020 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 APLFQ8IW19 511 aaPredicted RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 SIX5Q8N196 739 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 KLHL1Q9NR64 748 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 RRM2P31350 389 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 CHKAP35790 457 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 C2orf69Q8N8R5 385 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 RIT2Q99578 217 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TRIM8Q9BZR9 551 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 SENP6Q9GZR1 1112 aaPredicted RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 POMKQ9H5K3 350 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 ERVK-10P10266 1014 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 GPC1P35052 558 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 NTRK3Q16288 839 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CDH24Q86UP0 819 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 LINC00116Q8NCU8 138 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 MID1IP1Q9NPA3 183 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 DUSP12Q9UNI6 340 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 A0A0A6YYK5 440 aaPredicted RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 LOC100506127A0A0U1RQW1 187 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 C2orf71A6NGG8 1288 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 A8MX80 341 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 VPS26AO75436 327 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CYP2C9P11712 490 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 INAQ16352 499 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 SPPL2AQ8TCT8 520 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 NCKIPSDQ9NZQ3 722 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 E9PCH4 1651 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 C2orf81A6NN90 581 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CNOT3O75175 753 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 STAU1O95793 577 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 TSPAN8P19075 237 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CYP2B6P20813 491 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 AMPD1P23109 780 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CNGA2Q16280 664 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 PDZK1Q5T2W1 519 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 MRNIPQ6NTE8 343 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 C11orf88Q6PI97 169 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 ALYREFQ86V81 257 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 PLA2G4CQ9UP65 541 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 MRASO14807 208 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CXCL8P10145 99 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 DDX5P17844 614 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 DSG3P32926 999 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 CDH8P55286 799 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 FIGNQ5HY92 759 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 UBE2OQ9C0C9 1292 aaKnown RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 RMND5AQ9H871 391 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 PADI4Q9UM07 663 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 TPP1O14773 563 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 HALP42357 657 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 PREPLQ4J6C6 727 aaPredicted RBP12.36□□□□□ -0.43
SMG6-201ENST00000263073 CBWD6Q4V339 395 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CBWD3Q5JTY5 395 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CBWD5Q5RIA9 395 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CARNMT1Q8N4J0 409 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 KAZALD1Q96I82 304 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 CEP44Q9C0F1 390 aa12.36□□□□□ -0.43
SMG6-201ENST00000263073 TAF6P49848 677 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DLG4P78352 724 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 BFSP2Q13515 415 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 MRPS26Q9BYN8 205 aaKnown RBP12.35□□□□□ -0.43
SMG6-201ENST00000263073 TRIM39Q9HCM9 518 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 ARHGEF3Q9NR81 526 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 COMMD8Q9NX08 183 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 A0A1B0GW55 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 KCNK1O00180 336 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 GH1P01241 217 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DUX4L2P0CJ85 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DUX4L3P0CJ86 424 aa12.35□□□□□ -0.43
SMG6-201ENST00000263073 DUX4L4P0CJ87 422 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms