RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 C2orf15Q8WU43 125 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 OXCT2Q9BYC2 517 aaPredicted RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 ANAPC1Q9H1A4 1944 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 AVENQ9NQS1 362 aaPredicted RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 PARVAQ9NVD7 372 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 SAE1Q9UBE0 346 aaPredicted RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 SNX24Q9Y343 169 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 CCDC66A2RUB6 948 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 TMEM191CA6NGB0 347 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 KRT14P02533 472 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 FYNP06241 537 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 RHOP08100 348 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 IRF1P10914 325 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 RALAP11233 206 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 KRT3P12035 628 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 YWHAGP61981 247 aaKnown RBP eCLIP12.6□□□□□ -0.39
NIP7-201ENST00000254940 DR1Q01658 176 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 NME3Q13232 169 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 TEAD2Q15562 447 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 GLE1Q53GS7 698 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 MAB21L3Q8N8X9 362 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 OR2W6PQ8NHA6 318 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 VPS18Q9P253 973 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
NIP7-201ENST00000254940 TTC7AQ9ULT0 858 aaPredicted RBP12.6□□□□□ -0.39
NIP7-201ENST00000254940 CAPN9O14815 690 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 NUMBP49757 651 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 TFF2Q03403 129 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 EFEMP1Q12805 493 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ADAM15Q13444 863 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 KCNC3Q14003 757 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 CCDC137Q6PK04 289 aaKnown RBP12.59□□□□□ -0.39
NIP7-201ENST00000254940 GET4Q7L5D6 327 aaPredicted RBP12.59□□□□□ -0.39
NIP7-201ENST00000254940 EFHBQ8N7U6 833 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 NETO2Q8NC67 525 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 RXFP2Q8WXD0 754 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 KCTD13Q8WZ19 329 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 PPP2R3CQ969Q6 453 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 PSMG2Q969U7 264 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 HAUS1Q96CS2 278 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ZSWIM3Q96MP5 696 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 MTMR10Q9NXD2 777 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 OBSL1O75147 1896 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ATP8B1O43520 1251 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 LTFP02788 710 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 CALB1P05937 261 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 MYBL1P10243 752 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 CEBPBP17676 345 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 SMARCB1Q12824 385 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 MAP9Q49MG5 647 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 PABPC1LQ4VXU2 614 aaKnown RBP12.59□□□□□ -0.39
NIP7-201ENST00000254940 BTBD8Q5XKL5 378 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 TMC8Q8IU68 726 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ELMOD1Q8N336 334 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ARL14EPQ8N8R7 260 aaPredicted RBP12.59□□□□□ -0.39
NIP7-201ENST00000254940 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 MCRS1Q96EZ8 462 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 HSFY1Q96LI6 401 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 PRKD2Q9BZL6 878 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 RNF38Q9H0F5 515 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ZWILCHQ9H900 591 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 ASAH2Q9NR71 780 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 GKN1Q9NS71 199 aa12.59□□□□□ -0.39
NIP7-201ENST00000254940 CCDC188H7C350 402 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 TUBBP07437 444 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 CSH1P0DML2 217 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 CSH2P0DML3 217 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 RARGP13631 454 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 CTNNA2P26232 953 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 VPS41P49754 854 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 NRLP54845 237 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 C10orf120Q5SQS8 335 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
NIP7-201ENST00000254940 JAMLQ86YT9 394 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 CCDC105Q8IYK2 499 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 CCDC33Q8N5R6 958 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 CASP10Q92851 521 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 WBP2Q969T9 261 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 NACA2Q9H009 215 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 ADAM7Q9H2U9 754 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 MRPL47Q9HD33 250 aaKnown RBP12.58□□□□□ -0.4
NIP7-201ENST00000254940 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 PDGFRAP16234 1089 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 MCM3P25205 808 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 ACADSBP45954 432 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 PLTPP55058 493 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 YWHAZP63104 245 aaKnown RBP12.58□□□□□ -0.4
NIP7-201ENST00000254940 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
NIP7-201ENST00000254940 PEBP4Q96S96 227 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms