RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 RPL9P32969 192 aaKnown RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ALDH1A3P47895 512 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 NTHL1P78549 312 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 RCOR2Q8IZ40 523 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 DCP1BQ8IZD4 617 aaKnown RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CASD1Q96PB1 797 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 C17orf80Q9BSJ5 609 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 RAB17Q9H0T7 212 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 KIF9Q9HAQ2 790 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 LRRC4CQ9HCJ2 640 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 WDR35Q9P2L0 1181 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 MTRF1LQ9UGC7 380 aaKnown RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 OGDHLQ9ULD0 1010 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CHMP2BQ9UQN3 213 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 SLC4A7Q9Y6M7 1214 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 APOL1O14791 398 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 SLC1A1P43005 524 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CYP4F8P98187 520 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ROR1Q01973 937 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 PDIA2Q13087 525 aaKnown RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 SLC29A2Q14542 456 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 FASTKD3Q14CZ7 662 aaKnown RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ERMARDQ5T6L9 678 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CHSY1Q86X52 802 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 KLHL23Q8NBE8 558 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ACTRT1Q8TDG2 376 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ARL8AQ96BM9 186 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ZNF558Q96NG5 402 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 KLHL5Q96PQ7 755 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 HNRNPABQ99729 332 aaKnown RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 AVENQ9NQS1 362 aaPredicted RBP12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ACTL7AQ9Y615 435 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 H3BQF6 201 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 YWHAQP27348 245 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 GRIA1P42261 906 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 DSC3Q14574 896 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 DENND1CQ8IV53 801 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CRYBG2Q8N1P7 616 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 GDAP2Q9NXN4 497 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CTNNAL1Q9UBT7 734 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 CABIN1Q9Y6J0 2220 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 PMPCBO75439 489 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 EOMESO95936 686 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 JCHAINP01591 159 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 SETSIPP0DME0 302 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 PBX2P40425 430 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 GJA8P48165 433 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 LRRC14Q15048 493 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ZNF598Q86UK7 904 aaKnown RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 FUT8Q9BYC5 575 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 DCLK3Q9C098 648 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 WDR27A2RRH5 827 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 WDR91A4D1P6 747 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 XPO1O14980 1071 aaKnown RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 TLR5O60602 858 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 SHBGP04278 402 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 LRPAP1P30533 357 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 MATKP42679 507 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 CDK7P50613 346 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 PGGT1BP53609 377 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 TWF1Q12792 350 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 BRD3Q15059 726 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ACCSLQ4AC99 568 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 STXBP5Q5T5C0 1151 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 HEATR6Q6AI08 1181 aaKnown RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ARHGEF18Q6ZSZ5 1173 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 FIBCD1Q8N539 461 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ZNF366Q8N895 744 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ATL2Q8NHH9 583 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 PCDH19Q8TAB3 1148 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 RPGRIP1Q96KN7 1286 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ZIM3Q96PE6 472 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 TCF25Q9BQ70 676 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 HCFC1R1Q9NWW0 138 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 GJB5O95377 273 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 CA3P07451 260 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 RARGP13631 454 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 H2AFXP16104 143 aaPredicted RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 ATP2A2P16615 1042 aaKnown RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 DAOAP59103 153 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 TUBB2AQ13885 445 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 USP41Q3LFD5 358 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 TRAF7Q6Q0C0 670 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 LRRC43Q8N309 656 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 SLC25A41Q8N5S1 370 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 UBR7Q8N806 425 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 KCTD15Q96SI1 283 aaPredicted RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 TUBB2BQ9BVA1 445 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 PCDH18Q9HCL0 1135 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 NOVA2Q9UNW9 492 aaKnown RBP12.06□□□□□ -0.48
LIN28A-201ENST00000254231 DERAQ9Y315 318 aa12.06□□□□□ -0.48
LIN28A-201ENST00000254231 SCN10AQ9Y5Y9 1956 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 hCG_1818297A0A087WSY0 165 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 TCRBV7S3A2A0A539 114 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms