RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 HS6ST1O60243 411 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 TDP2O95551 362 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZNF682O95780 498 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 FDFT1P37268 417 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SNX32Q86XE0 403 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 UNC45BQ8IWX7 931 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 APOPT1Q96IL0 206 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 PTTG2Q9NZH5 202 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 PRKAG2Q9UGJ0 569 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 RAPGEFL1Q9UHV5 662 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 HAT1O14929 419 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 DCXO43602 365 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 FBXW4P57775 412 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 NCALDP61601 193 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 KRT77Q7Z794 578 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 DPP10Q8N608 796 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 NAT14Q8WUY8 206 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 MRPL48Q96GC5 212 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 RNF145Q96MT1 663 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 TSPAN18Q96SJ8 248 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 KIFC1Q9BW19 673 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 AGO2Q9UKV8 859 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 MYMKA6NI61 221 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 H3BNX3 289 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SLC26A4O43511 780 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 PARNO95453 639 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 IFNA14P01570 189 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 MYL4P12829 197 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 NPR3P17342 541 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SLC1A6P48664 564 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 CCR3P51677 355 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SPP2Q13103 211 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 CYP2R1Q6VVX0 501 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 KRT78Q8N1N4 520 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 RASSF5Q8WWW0 418 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
PCDHGA3-201ENST00000253812 MYCP01106 439 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 ALOX15P16050 662 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 TGM2P21980 687 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 USP4Q13107 963 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 FBXO33Q7Z6M2 555 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 TTC7BQ86TV6 843 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 SH3KBP1Q96B97 665 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 FAM120BQ96EK7 910 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 ACTL7BQ9Y614 415 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PRKAA2P54646 552 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 TSEN34Q9BSV6 310 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 SLC25A23Q9BV35 468 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PHF20Q9BVI0 1012 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 TLR10Q9BXR5 811 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 SIK2Q9H0K1 926 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 SEMA6AQ9H2E6 1030 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 EPB41L1Q9H4G0 881 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 DNAAF2Q9NVR5 837 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 FLT1P17948 1338 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 SDR42E2A6NKP2 422 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 CDK7P50613 346 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 OLR1P78380 273 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 AKIRIN2Q53H80 203 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 BHMTQ93088 406 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 ARHGAP20Q9P2F6 1191 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 BIRC5O15392 142 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 LYNP07948 512 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 IST1P53990 364 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PDCD4Q53EL6 469 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZC2HC1CQ53FD0 456 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 CDKAL1Q5VV42 579 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PACS1Q6VY07 963 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 CREG2Q8IUH2 290 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 BHLHE22Q8NFJ8 381 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 LRRC20Q8TCA0 184 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 RAVER2Q9HCJ3 691 aaKnown RBP13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 GPRC5DQ9NZD1 345 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 RAD54BQ9Y620 910 aa13.5□□□□□ -0.25
PCDHGA3-201ENST00000253812 DFFAO00273 331 aa13.49□□□□□ -0.25
PCDHGA3-201ENST00000253812 TMCC2O75069 709 aa13.49□□□□□ -0.25
PCDHGA3-201ENST00000253812 SLC26A3P40879 764 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms