RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DUSP16Q9BY84 665 aa9.73□□□□□ -0.85
TGFB3-201ENST00000238682 SEMA4AQ9H3S1 761 aa9.73□□□□□ -0.85
TGFB3-201ENST00000238682 GOLGA2P5Q9HBQ8 144 aa9.73□□□□□ -0.85
TGFB3-201ENST00000238682 WDR6Q9NNW5 1121 aaKnown RBP9.73□□□□□ -0.85
TGFB3-201ENST00000238682 ST7Q9NRC1 585 aa9.73□□□□□ -0.85
TGFB3-201ENST00000238682 PARVAQ9NVD7 372 aa9.73□□□□□ -0.85
TGFB3-201ENST00000238682 RRN3Q9NYV6 651 aa9.73□□□□□ -0.85
TGFB3-201ENST00000238682 CES2O00748 559 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 LIN7AO14910 233 aaPredicted RBP9.72□□□□□ -0.85
TGFB3-201ENST00000238682 MMEP08473 750 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 SLC1A1P43005 524 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 LMAN1P49257 510 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 CLCN6P51797 869 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 PLD1Q13393 1074 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 LAMB3Q13751 1172 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 SLC8B1Q6J4K2 584 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 TMEM110Q86TL2 294 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 RBM23Q86U06 439 aaKnown RBP9.72□□□□□ -0.85
TGFB3-201ENST00000238682 MCOLN2Q8IZK6 566 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 C3orf20Q8ND61 904 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 CYFIP2Q96F07 1278 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 SPATA7Q9P0W8 599 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 MUTYHQ9UIF7 546 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 DUSP12Q9UNI6 340 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 MACROD2A1Z1Q3 448 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 ENC1O14682 589 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 FGF19O95750 216 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 CD19P15391 556 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 PRLRP16471 622 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 STIP1P31948 543 aaKnown RBP9.72□□□□□ -0.85
TGFB3-201ENST00000238682 GPD2P43304 727 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 CDH8P55286 799 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 GFPT1Q06210 699 aaPredicted RBP9.72□□□□□ -0.85
TGFB3-201ENST00000238682 GPR17Q13304 367 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 RARS2Q5T160 578 aaKnown RBP9.72□□□□□ -0.85
TGFB3-201ENST00000238682 PLEKHA7Q6IQ23 1121 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 OSTM1Q86WC4 334 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 TTC30AQ86WT1 665 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 ERICH1Q86X53 443 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 ARHGAP18Q8N392 663 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 ZNF276Q8N554 614 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 SPATA17Q96L03 361 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 NAPGQ99747 312 aaPredicted RBP9.72□□□□□ -0.85
TGFB3-201ENST00000238682 EPC1Q9H2F5 836 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 RETREG1Q9H6L5 497 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 FBXW11Q9UKB1 542 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 TMEM98Q9Y2Y6 226 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 PCDHGC5Q9Y5F6 944 aa9.72□□□□□ -0.85
TGFB3-201ENST00000238682 SCN1AP35498 2009 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 SOBPA7XYQ1 873 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 CFAP99D6REC4 459 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 PROB1E7EW31 1015 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 TADA3O75528 432 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 FTLP02792 175 aaPredicted RBP9.71□□□□□ -0.85
TGFB3-201ENST00000238682 CNPP09543 421 aaKnown RBP9.71□□□□□ -0.85
TGFB3-201ENST00000238682 NPR3P17342 541 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 GALCP54803 685 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 GEMIN4P57678 1058 aaKnown RBP9.71□□□□□ -0.85
TGFB3-201ENST00000238682 RAB33AQ14088 237 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.85
TGFB3-201ENST00000238682 LILRA6Q6PI73 481 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 MYO1HQ8N1T3 1032 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 CEP112Q8N8E3 955 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 CCDC89Q8N998 374 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 SLC35F5Q8WV83 523 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 OVCA2Q8WZ82 227 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 ASIC4Q96FT7 647 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 PCDHB18PQ96TA0 734 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 PRKD2Q9BZL6 878 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 SLC2A4RGQ9NR83 387 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 WNT16Q9UBV4 365 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 TSPAN16Q9UKR8 245 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 PCDHB5Q9Y5E4 795 aa9.71□□□□□ -0.85
TGFB3-201ENST00000238682 GALR2O43603 387 aaPredicted RBP9.71□□□□□ -0.86
TGFB3-201ENST00000238682 KATNA1O75449 491 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 SOX11P35716 441 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 RAP1GAPP47736 663 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 AFF1P51825 1210 aaKnown RBP9.71□□□□□ -0.86
TGFB3-201ENST00000238682 RPL10AP62906 217 aaKnown RBP9.71□□□□□ -0.86
TGFB3-201ENST00000238682 TUBB4BP68371 445 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 ROR2Q01974 943 aaKnown RBP9.71□□□□□ -0.86
TGFB3-201ENST00000238682 PTP4A2Q12974 167 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 TDGQ13569 410 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 TUSC1Q2TAM9 212 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 C1orf228Q6PIY5 440 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 SLFN11Q7Z7L1 901 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 SLC20A1Q8WUM9 679 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 BCL7CQ8WUZ0 217 aaPredicted RBP9.71□□□□□ -0.86
TGFB3-201ENST00000238682 TFAP2BQ92481 460 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 C18orf8Q96DM3 657 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 MCRS1Q96EZ8 462 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 TWNKQ96RR1 684 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 VN1R3Q9BXE9 311 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 OSBPL6Q9BZF3 934 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 POMKQ9H5K3 350 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 DMAP1Q9NPF5 467 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms